RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TMEM89A2RUT3 159 aa11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 K7EQM0 130 aa11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 HOXA5P20719 270 aa11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 RPL19P84098 196 aaKnown RBP11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 GOLT1AQ6ZVE7 132 aa11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 NHLRC2Q8NBF2 726 aa11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 GNB4Q9HAV0 340 aa11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 VPREB3Q9UKI3 123 aa11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 RPH3ALQ9UNE2 315 aa11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 TENM4Q6N022 2769 aa11.05□□□□□ -0.64
RTFDC1-201ENST00000023939 A0A0G2JLM5 398 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 DIRC3C9JPN6 131 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 NUDT10Q8NFP7 164 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 NUDT11Q96G61 164 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 GRAMD2BQ96HH9 432 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 METTL26Q96S19 204 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 ZFP30Q9Y2G7 519 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 IGHV3-35A0A0C4DH35 117 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 C19orf71A6NCJ1 209 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 FBLL1A6NHQ2 334 aaKnown RBP11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 ZNF705GA8MUZ8 300 aaPredicted RBP11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 GATCO43716 136 aaKnown RBP11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 ARL3P36405 182 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 MEOX2P50222 304 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 NDUFA6P56556 154 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 COX19Q49B96 90 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 CT83Q5H943 113 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 FAM209BQ5JX69 171 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 TEX29Q8N6K0 151 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 PRSS22Q9GZN4 317 aa11.04□□□□□ -0.64
RTFDC1-201ENST00000023939 NAV2Q8IVL1 2488 aa11.03□□□□□ -0.64
RTFDC1-201ENST00000023939 NDUFA4O00483 81 aa11.03□□□□□ -0.64
RTFDC1-201ENST00000023939 IGHG4P01861 327 aa11.03□□□□□ -0.64
RTFDC1-201ENST00000023939 CSN1S1P47710 185 aa11.03□□□□□ -0.64
RTFDC1-201ENST00000023939 PSG3Q16557 428 aa11.03□□□□□ -0.64
RTFDC1-201ENST00000023939 COA6Q5JTJ3 125 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-201ENST00000023939 KLK15Q9H2R5 256 aa11.03□□□□□ -0.64
RTFDC1-201ENST00000023939 UTP20O75691 2785 aaKnown RBP11.03□□□□□ -0.64
RTFDC1-201ENST00000023939 PF4V1P10720 104 aa11.02□□□□□ -0.65
RTFDC1-201ENST00000023939 CDX1P47902 265 aaPredicted RBP11.02□□□□□ -0.65
RTFDC1-201ENST00000023939 SGK494Q96LW2 274 aa11.02□□□□□ -0.65
RTFDC1-201ENST00000023939 ZNF331Q9NQX6 463 aaPredicted RBP11.02□□□□□ -0.65
RTFDC1-201ENST00000023939 SERTAD4Q9NUC0 356 aa11.02□□□□□ -0.65
RTFDC1-201ENST00000023939 TRAPPC1Q9Y5R8 145 aa11.02□□□□□ -0.65
RTFDC1-201ENST00000023939 TRAV8-1A0A0A6YYK1 113 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 S100A8P05109 93 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 PSG8Q9UQ74 426 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 POLQO75417 2590 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 IGHV3OR16-8A0A075B7F1 116 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 IZUMO1RA6ND01 250 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 NPIPB6E9PJ23 425 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 M0R3E3 92 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 PSMB8P28062 276 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 AKR1D1P51857 326 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 C16orf54Q6UWD8 224 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 COX8CQ7Z4L0 72 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 PRNTQ86SH4 94 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 SLC50A1Q9BRV3 221 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 GNB1LQ9BYB4 327 aa11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 RPP21Q9H633 154 aaKnown RBP11.01□□□□□ -0.65
RTFDC1-201ENST00000023939 ZNF785A8K8V0 405 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 MT-ND6P03923 174 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 PRR27Q6MZM9 219 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 WDR73Q6P4I2 378 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 RASL11AQ6T310 242 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 LINC00322Q6ZN03 302 aaPredicted RBP11□□□□□ -0.65
RTFDC1-201ENST00000023939 LINC00518Q8N0U6 118 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 WFDC11Q8NEX6 87 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 OR4B1Q8NGF8 309 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 OR4X2Q8NGF9 303 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 CSPG4Q6UVK1 2322 aa11□□□□□ -0.65
RTFDC1-201ENST00000023939 FAM231BA6NCW3 169 aa10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 TRBV12-3P01733 135 aa10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 HIST2H2BCQ6DN03 193 aa10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 WIPF2Q8TF74 440 aaPredicted RBP10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 MRPL53Q96EL3 112 aaKnown RBP10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 FOXC2Q99958 501 aa10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 NPFFR1Q9GZQ6 430 aa10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 GFRA4Q9GZZ7 299 aa10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 NAT8BQ9UHF3 227 aa10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 SETXQ7Z333 2677 aaKnown RBP10.99□□□□□ -0.65
RTFDC1-201ENST00000023939 A8MWL6 223 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 CA1P00915 261 aaPredicted RBP10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 P01737 135 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 APOHP02749 345 aaPredicted RBP10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 CIARTQ8N365 385 aaPredicted RBP10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 GLMPQ8WWB7 406 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 DAZAP1Q96EP5 407 aaKnown RBP10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 CLEC5AQ9NY25 188 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 CRYBG3Q68DQ2 2970 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 IFITM10A6NMD0 228 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 CHEK1O14757 476 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 HOXA3O43365 443 aaPredicted RBP10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 TCL1AP56279 114 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 HIST3H2BBQ8N257 126 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 Q8N2B8 174 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 GBGT1Q8N5D6 347 aa10.98□□□□□ -0.65
RTFDC1-201ENST00000023939 TMEM86BQ8N661 226 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms