RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 FAM78BQ5VT40 261 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 LINC00305Q7Z4B0 112 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 LINC00482Q8N8I6 264 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 ZNF680Q8NEM1 530 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 OR9G4Q8NGQ1 327 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 FAM213BQ8TBF2 198 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 GATAD1Q8WUU5 269 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 DLX4Q92988 240 aaPredicted RBP7.13□□□□□ -1.27
PHGDH-228ENST00000641847 RCHY1Q96PM5 261 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 RNF2Q99496 336 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 SHANK2-AS3Q9BTD1 123 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 SCRT1Q9BWW7 348 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 MRPL32Q9BYC8 188 aaKnown RBP7.13□□□□□ -1.27
PHGDH-228ENST00000641847 DNAJC4Q9NNZ3 241 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 DAZ1Q9NQZ3 744 aaKnown RBP7.13□□□□□ -1.27
PHGDH-228ENST00000641847 RPRMQ9NS64 109 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 MRPL27Q9P0M9 148 aaKnown RBP7.13□□□□□ -1.27
PHGDH-228ENST00000641847 PEMTQ9UBM1 199 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 UBQLN2Q9UHD9 624 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 FUT9Q9Y231 359 aa7.13□□□□□ -1.27
PHGDH-228ENST00000641847 IGHV3OR16-13A0A075B7E8 117 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 IGHV3-74A0A0B4J1X5 117 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 IGHV3-66A0A0C4DH42 116 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 IGHV7-4-1A0A0J9YVY3 117 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 A0A1W2PPV4 95 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 H3BRN7 92 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 K7EMT4 169 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 EDN2P20800 178 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 NPPCP23582 126 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 CRYBB3P26998 211 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 S100A7P31151 101 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 CDC34P49427 236 aaPredicted RBP7.12□□□□□ -1.27
PHGDH-228ENST00000641847 FHITP49789 147 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 RAB5CP51148 216 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 IFITM2Q01629 132 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 MORN5Q5VZ52 161 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 LEMD1Q68G75 181 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 DPPA3Q6W0C5 159 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 MIR17HGQ75NE6 70 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 SSX7Q7RTT5 188 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 S100A7AQ86SG5 101 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 RPP25LQ8N5L8 163 aaKnown RBP7.12□□□□□ -1.27
PHGDH-228ENST00000641847 RNF141Q8WVD5 230 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 NARS2Q96I59 477 aaKnown RBP7.12□□□□□ -1.27
PHGDH-228ENST00000641847 SLC25A39Q9BZJ4 359 aaPredicted RBP7.12□□□□□ -1.27
PHGDH-228ENST00000641847 ACTR3CQ9C0K3 210 aaPredicted RBP7.12□□□□□ -1.27
PHGDH-228ENST00000641847 ZMAT4Q9H898 229 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 SEPSECSQ9HD40 501 aaKnown RBP7.12□□□□□ -1.27
PHGDH-228ENST00000641847 PFDN2Q9UHV9 154 aa7.12□□□□□ -1.27
PHGDH-228ENST00000641847 TRAV5A0A0B4J249 113 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 CTXND1A0A1B0GTU2 59 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 C2orf70A6NJV1 201 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 ZNF98A6NK75 572 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 ZNF705EA8MWA4 302 aaPredicted RBP7.11□□□□□ -1.27
PHGDH-228ENST00000641847 SEC14L6B5MCN3 397 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 OVOL1O14753 267 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 HMGB3O15347 200 aaKnown RBP7.11□□□□□ -1.27
PHGDH-228ENST00000641847 APOHP02749 345 aaPredicted RBP7.11□□□□□ -1.27
PHGDH-228ENST00000641847 ZNF726P1Q15940 193 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 ZFAND6Q6FIF0 208 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 ZNF767PQ75MW2 155 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 SLC25A2Q9BXI2 301 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 U3KQE9 123 aa7.11□□□□□ -1.27
PHGDH-228ENST00000641847 A0A1B0GV50 99 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 MAP1LC3B2A6NCE7 125 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 C8orf88P0DMB2 117 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 BMI1P35226 326 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 TAS2R45P59539 299 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 KHDC3LQ587J8 217 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 LCN15Q6UWW0 184 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 RAB24Q969Q5 203 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 MARC2Q969Z3 335 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 GRAMD2BQ96HH9 432 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 ELOVL1Q9BW60 279 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 MAP1LC3BQ9GZQ8 125 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 TMEM231Q9H6L2 316 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 TECRQ9NZ01 308 aaKnown RBP7.1□□□□□ -1.27
PHGDH-228ENST00000641847 SMPXQ9UHP9 88 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 RNF24Q9Y225 148 aa7.1□□□□□ -1.27
PHGDH-228ENST00000641847 A0A1W2PS18 150 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 RBMY1BA6NDE4 496 aaKnown RBP7.09□□□□□ -1.27
PHGDH-228ENST00000641847 RBMY1EA6NEQ0 496 aaKnown RBP7.09□□□□□ -1.27
PHGDH-228ENST00000641847 CHEK1O14757 476 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 BUB3O43684 328 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 OR7C2O60412 319 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 CSN3P07498 182 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 RBMY1DP0C7P1 496 aaKnown RBP7.09□□□□□ -1.27
PHGDH-228ENST00000641847 STAG3L2P0CL84 134 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 STAG3L3P0CL85 134 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 ARL14EPLP0DKL9 152 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 FOLR2P14207 255 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 CBLN1P23435 193 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 FGF8P55075 233 aaPredicted RBP7.09□□□□□ -1.27
PHGDH-228ENST00000641847 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 IL34Q6ZMJ4 242 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 ADAMTSL5Q6ZMM2 481 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 IQCF2Q8IXL9 164 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 OR8I2Q8N0Y5 310 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 LRRC20Q8TCA0 184 aa7.09□□□□□ -1.27
PHGDH-228ENST00000641847 DYNLRB2Q8TF09 96 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms