RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 CRYBB3P26998 211 aa14.06□□□□□ -0.16
PHGDH-209ENST00000641074 MYCNOSP40205 109 aa14.06□□□□□ -0.16
PHGDH-209ENST00000641074 SLC35B1P78383 322 aa14.06□□□□□ -0.16
PHGDH-209ENST00000641074 RHEBQ15382 184 aa14.06□□□□□ -0.16
PHGDH-209ENST00000641074 TEX38Q6PEX7 206 aa14.06□□□□□ -0.16
PHGDH-209ENST00000641074 SERTAD4Q9NUC0 356 aa14.06□□□□□ -0.16
PHGDH-209ENST00000641074 IGLC2P0DOY2 106 aa14.05□□□□□ -0.16
PHGDH-209ENST00000641074 PNRC1Q12796 327 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-209ENST00000641074 CBLN2Q8IUK8 224 aa14.05□□□□□ -0.16
PHGDH-209ENST00000641074 RPLP1P05386 114 aaKnown RBP14.04□□□□□ -0.16
PHGDH-209ENST00000641074 SRD5A1P18405 259 aa14.04□□□□□ -0.16
PHGDH-209ENST00000641074 RPL15P61313 204 aaKnown RBP14.04□□□□□ -0.16
PHGDH-209ENST00000641074 SCGB2A2Q13296 93 aa14.04□□□□□ -0.16
PHGDH-209ENST00000641074 FOXE3Q13461 319 aa14.04□□□□□ -0.16
PHGDH-209ENST00000641074 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-209ENST00000641074 OR4F17Q8NGA8 305 aa14.04□□□□□ -0.16
PHGDH-209ENST00000641074 C17orf77Q96MU5 243 aa14.04□□□□□ -0.16
PHGDH-209ENST00000641074 OR5B12Q96R08 314 aa14.04□□□□□ -0.16
PHGDH-209ENST00000641074 CUBNO60494 3623 aa14.03□□□□□ -0.16
PHGDH-209ENST00000641074 PGPA6NDG6 321 aa14.03□□□□□ -0.16
PHGDH-209ENST00000641074 CLDN34H7C241 214 aa14.03□□□□□ -0.16
PHGDH-209ENST00000641074 ELANEP08246 267 aa14.03□□□□□ -0.16
PHGDH-209ENST00000641074 S100A7P31151 101 aa14.03□□□□□ -0.16
PHGDH-209ENST00000641074 RPL23P62829 140 aaKnown RBP14.03□□□□□ -0.16
PHGDH-209ENST00000641074 Q6ZSV7 163 aa14.03□□□□□ -0.16
PHGDH-209ENST00000641074 Q9H3A6 140 aa14.03□□□□□ -0.16
PHGDH-209ENST00000641074 RNF24Q9Y225 148 aa14.03□□□□□ -0.16
PHGDH-209ENST00000641074 MTORP42345 2549 aa14.03□□□□□ -0.16
PHGDH-209ENST00000641074 TRBV20OR9-2A0A075B6H5 130 aa14.02□□□□□ -0.16
PHGDH-209ENST00000641074 TRBV19A0A075B6N1 114 aa14.02□□□□□ -0.16
PHGDH-209ENST00000641074 ZNF207O43670 478 aaKnown RBP14.02□□□□□ -0.16
PHGDH-209ENST00000641074 RPL35P42766 123 aaKnown RBP14.02□□□□□ -0.16
PHGDH-209ENST00000641074 ADIRFQ15847 76 aa14.02□□□□□ -0.16
PHGDH-209ENST00000641074 OR8I2Q8N0Y5 310 aa14.02□□□□□ -0.16
PHGDH-209ENST00000641074 C2CD4CQ8TF44 421 aa14.02□□□□□ -0.16
PHGDH-209ENST00000641074 PEF1Q9UBV8 284 aaKnown RBP14.02□□□□□ -0.16
PHGDH-209ENST00000641074 CDC42EP3Q9UKI2 254 aa14.02□□□□□ -0.16
PHGDH-209ENST00000641074 HIVEP2P31629 2446 aa14.02□□□□□ -0.17
PHGDH-209ENST00000641074 NDUFA4O00483 81 aa14.01□□□□□ -0.17
PHGDH-209ENST00000641074 BUB3O43684 328 aa14.01□□□□□ -0.17
PHGDH-209ENST00000641074 RPL7P18124 248 aaKnown RBP14.01□□□□□ -0.17
PHGDH-209ENST00000641074 FAM209BQ5JX69 171 aa14.01□□□□□ -0.17
PHGDH-209ENST00000641074 UNQ9165/PRO28630Q6UXU0 137 aa14.01□□□□□ -0.17
PHGDH-209ENST00000641074 RNF152Q8N8N0 203 aa14.01□□□□□ -0.17
PHGDH-209ENST00000641074 MYOZ3Q8TDC0 251 aa14.01□□□□□ -0.17
PHGDH-209ENST00000641074 METTL26Q96S19 204 aa14.01□□□□□ -0.17
PHGDH-209ENST00000641074 B4DEV8 164 aa14.01□□□□□ -0.17
PHGDH-209ENST00000641074 GGCTO75223 188 aaKnown RBP14.01□□□□□ -0.17
PHGDH-209ENST00000641074 APOHP02749 345 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-209ENST00000641074 HELTA6NFD8 242 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 PGPEP1LA6NFU8 196 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 SLC25A5P05141 298 aaKnown RBP14□□□□□ -0.17
PHGDH-209ENST00000641074 GNG5P63218 68 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 EXOC3-AS1Q8N2X6 119 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 TCEAL7Q9BRU2 100 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 OTORQ9NRC9 128 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 SMCO4Q9NRQ5 59 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 EPDR1Q9UM22 224 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 SMAD5-AS1Q9Y6J3 95 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 U3KQE9 123 aa14□□□□□ -0.17
PHGDH-209ENST00000641074 IGHV3OR16-13A0A075B7E8 117 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 A0A087WWC5 75 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 IGHV3-49A0A0A0MS15 119 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 IGHV3-74A0A0B4J1X5 117 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 IGHV3-66A0A0C4DH42 116 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 SLC17A3O00476 420 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 PEX7O00628 323 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 RNASE1P07998 156 aaKnown RBP13.99□□□□□ -0.17
PHGDH-209ENST00000641074 CD99P14209 185 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 Q71RC1 249 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-209ENST00000641074 LINC01551Q86U37 167 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 KLHDC1Q8N7A1 406 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 ZNF418Q8TF45 676 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-209ENST00000641074 LINC00479Q96M42 142 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 AURKAIP1Q9NWT8 199 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-209ENST00000641074 SIGLEC15Q6ZMC9 328 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 C5orf17Q8NAS9 161 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 HIST1H2BAQ96A08 127 aa13.99□□□□□ -0.17
PHGDH-209ENST00000641074 C9JCJ5 164 aa13.98□□□□□ -0.17
PHGDH-209ENST00000641074 HILS1P60008 231 aa13.98□□□□□ -0.17
PHGDH-209ENST00000641074 OCC1Q8TAD7 63 aa13.98□□□□□ -0.17
PHGDH-209ENST00000641074 UBE2E2Q96LR5 201 aa13.98□□□□□ -0.17
PHGDH-209ENST00000641074 ZNF320A2RRD8 509 aa13.97□□□□□ -0.17
PHGDH-209ENST00000641074 PDE6HQ13956 83 aa13.97□□□□□ -0.17
PHGDH-209ENST00000641074 RNF212Q495C1 297 aa13.97□□□□□ -0.17
PHGDH-209ENST00000641074 CENPWQ5EE01 88 aa13.97□□□□□ -0.17
PHGDH-209ENST00000641074 C1orf194Q5T5A4 169 aa13.97□□□□□ -0.17
PHGDH-209ENST00000641074 LYPD1Q8N2G4 141 aa13.97□□□□□ -0.17
PHGDH-209ENST00000641074 TMEM190Q8WZ59 177 aa13.97□□□□□ -0.17
PHGDH-209ENST00000641074 FLNBO75369 2602 aaKnown RBP13.97□□□□□ -0.17
PHGDH-209ENST00000641074 TSPAN4O14817 238 aa13.96□□□□□ -0.17
PHGDH-209ENST00000641074 CRYBA1P05813 215 aa13.96□□□□□ -0.17
PHGDH-209ENST00000641074 LGALS1P09382 135 aaKnown RBP13.96□□□□□ -0.17
PHGDH-209ENST00000641074 FOSL1P15407 271 aa13.96□□□□□ -0.17
PHGDH-209ENST00000641074 ISOC2Q96AB3 205 aa13.96□□□□□ -0.17
PHGDH-209ENST00000641074 RPH3ALQ9UNE2 315 aa13.96□□□□□ -0.17
PHGDH-209ENST00000641074 TRAV34A0A0B4J273 112 aa13.96□□□□□ -0.18
PHGDH-209ENST00000641074 ATF4P18848 351 aaPredicted RBP13.96□□□□□ -0.18
PHGDH-209ENST00000641074 GNG4P50150 75 aa13.96□□□□□ -0.18
PHGDH-209ENST00000641074 CNN1P51911 297 aaKnown RBP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms