RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 HTR1DP28221 377 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 TSPOP30536 169 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 OR4C46A6NHA9 309 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 CA7P43166 264 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 ARF6P62330 175 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 MRGPRG-AS1Q2M3A8 158 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 MRPL27Q9P0M9 148 aaKnown RBP11.63□□□□□ -0.55
SCARB2-221ENST00000640341 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.63□□□□□ -0.55
SCARB2-221ENST00000640341 LEPROTL1O95214 131 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 GP9P14770 177 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 C8orf46Q8TAG6 207 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 ZNF596Q8TC21 504 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 TMEM70Q9BUB7 260 aa11.63□□□□□ -0.55
SCARB2-221ENST00000640341 SLC25A39Q9BZJ4 359 aaPredicted RBP11.63□□□□□ -0.55
SCARB2-221ENST00000640341 SNAI2O43623 268 aa11.62□□□□□ -0.55
SCARB2-221ENST00000640341 ASCL5Q7RTU5 278 aa11.62□□□□□ -0.55
SCARB2-221ENST00000640341 SERTM2A0A1B0GWG4 89 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 IL4P05112 153 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 GRNP28799 593 aaKnown RBP11.61□□□□□ -0.55
SCARB2-221ENST00000640341 FCGR2BP31994 310 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-221ENST00000640341 MYCNOSP40205 109 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 TRGV9Q99603 122 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 C7orf69Q9H7B7 122 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 TRAV9-2A0A087WT02 112 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 SFTPCP11686 197 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 PTTG1IPP53801 180 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 TMEM116Q8NCL8 245 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 URB1-AS1Q96HZ7 61 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 F11RQ9Y624 299 aaKnown RBP11.61□□□□□ -0.55
SCARB2-221ENST00000640341 SHISA9B4DS77 424 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 BUB1B-PAK6H3BSN5 160 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 TIMM23O14925 209 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 DLX6P56179 175 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 FXYD7P58549 80 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 RBPMS2Q6ZRY4 209 aaKnown RBP11.61□□□□□ -0.55
SCARB2-221ENST00000640341 BCL6BQ8N143 479 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-221ENST00000640341 WIPF2Q8TF74 440 aaPredicted RBP11.61□□□□□ -0.55
SCARB2-221ENST00000640341 FMC1Q96HJ9 113 aa11.61□□□□□ -0.55
SCARB2-221ENST00000640341 IGHV1-24A0A0C4DH33 117 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 LOC389332A0A1B0GUA5 103 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 C2orf70A6NJV1 201 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 TOMM40O96008 361 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 TEX45Q8NA69 505 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 IGLC1P0CG04 106 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 KLRD1Q13241 179 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 NGBQ9NPG2 151 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 C20orf202A1L168 122 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 NDUFB8O95169 186 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 ARMS2P0C7Q2 107 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 Q86TA4 180 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 LINC00311Q8N616 119 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 MLST8Q9BVC4 326 aa11.6□□□□□ -0.55
SCARB2-221ENST00000640341 LTAP01374 205 aa11.59□□□□□ -0.55
SCARB2-221ENST00000640341 CD3EP07766 207 aa11.59□□□□□ -0.55
SCARB2-221ENST00000640341 LINC00614P0C842 121 aa11.59□□□□□ -0.55
SCARB2-221ENST00000640341 OR8B3Q8NGG8 313 aa11.59□□□□□ -0.55
SCARB2-221ENST00000640341 IGFL4Q6B9Z1 124 aa11.59□□□□□ -0.55
SCARB2-221ENST00000640341 RASL11AQ6T310 242 aa11.59□□□□□ -0.55
SCARB2-221ENST00000640341 Q8NA96 180 aa11.59□□□□□ -0.55
SCARB2-221ENST00000640341 A0A1B0GXF2 115 aa11.58□□□□□ -0.55
SCARB2-221ENST00000640341 NCBP2LA6PVI3 153 aaKnown RBP11.58□□□□□ -0.55
SCARB2-221ENST00000640341 TEX22C9J3V5 150 aa11.58□□□□□ -0.55
SCARB2-221ENST00000640341 INS-IGF2F8WCM5 200 aa11.58□□□□□ -0.55
SCARB2-221ENST00000640341 MUC15Q8N387 334 aa11.58□□□□□ -0.55
SCARB2-221ENST00000640341 OR4F17Q8NGA8 305 aa11.58□□□□□ -0.55
SCARB2-221ENST00000640341 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.58□□□□□ -0.56
SCARB2-221ENST00000640341 CRYGCP07315 174 aa11.58□□□□□ -0.56
SCARB2-221ENST00000640341 TMUB1Q9BVT8 246 aa11.58□□□□□ -0.56
SCARB2-221ENST00000640341 SELENOKQ9Y6D0 94 aa11.58□□□□□ -0.56
SCARB2-221ENST00000640341 APOBEC3AP31941 199 aaPredicted RBP11.58□□□□□ -0.56
SCARB2-221ENST00000640341 ATP5L2Q7Z4Y8 100 aa11.58□□□□□ -0.56
SCARB2-221ENST00000640341 ZC2HC1AQ96GY0 325 aa11.58□□□□□ -0.56
SCARB2-221ENST00000640341 KLF12Q9Y4X4 402 aa11.58□□□□□ -0.56
SCARB2-221ENST00000640341 OR2J3O76001 311 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 IGKV1-17P01599 117 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 FOXC1Q12948 553 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 MPV17L2Q567V2 206 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 HSBP1L1C9JCN9 74 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 IGLV1-47P01700 117 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 BPIFA4PQ86YQ2 179 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 SYS1-DBNDD2H3BUS1 97 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 GNG7O60262 68 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 KLF5Q13887 457 aaPredicted RBP11.57□□□□□ -0.56
SCARB2-221ENST00000640341 LDLRAD2Q5SZI1 272 aa11.57□□□□□ -0.56
SCARB2-221ENST00000640341 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
SCARB2-221ENST00000640341 FAM71F2Q6NXP2 309 aa11.56□□□□□ -0.56
SCARB2-221ENST00000640341 PRSS3P2Q8NHM4 247 aa11.56□□□□□ -0.56
SCARB2-221ENST00000640341 LOC102724200A0A096LPH7 203 aaPredicted RBP11.56□□□□□ -0.56
SCARB2-221ENST00000640341 TNFRSF13BO14836 293 aaPredicted RBP11.56□□□□□ -0.56
SCARB2-221ENST00000640341 NUDT3O95989 172 aa11.56□□□□□ -0.56
SCARB2-221ENST00000640341 APOHP02749 345 aaPredicted RBP11.56□□□□□ -0.56
SCARB2-221ENST00000640341 VAMP3Q15836 100 aa11.56□□□□□ -0.56
SCARB2-221ENST00000640341 C8orf49Q96NF6 230 aa11.56□□□□□ -0.56
SCARB2-221ENST00000640341 PRSS22Q9GZN4 317 aa11.56□□□□□ -0.56
SCARB2-221ENST00000640341 OTORQ9NRC9 128 aa11.56□□□□□ -0.56
SCARB2-221ENST00000640341 CBY3A6NI87 242 aa11.55□□□□□ -0.56
SCARB2-221ENST00000640341 RELQ04864 619 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 316.9 ms