RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
SMN2-216ENST00000638794 OR4D5Q8NGN0 318 aa11.97□□□□□ -0.49
SMN2-216ENST00000638794 NACAE9PAV3 2078 aa11.97□□□□□ -0.49
SMN2-216ENST00000638794 IGLV2-18A0A075B6J9 118 aa11.96□□□□□ -0.49
SMN2-216ENST00000638794 IGFL4Q6B9Z1 124 aa11.96□□□□□ -0.49
SMN2-216ENST00000638794 OR1B1Q8NGR6 318 aa11.96□□□□□ -0.49
SMN2-216ENST00000638794 DEDD2Q8WXF8 326 aa11.96□□□□□ -0.49
SMN2-216ENST00000638794 IGF2BP2-AS1Q96M15 143 aa11.96□□□□□ -0.49
SMN2-216ENST00000638794 TMEM208Q9BTX3 173 aa11.96□□□□□ -0.49
SMN2-216ENST00000638794 TMEM147Q9BVK8 224 aa11.96□□□□□ -0.49
SMN2-216ENST00000638794 CNN1P51911 297 aaKnown RBP11.95□□□□□ -0.5
SMN2-216ENST00000638794 TMEM88Q6PEY1 159 aa11.95□□□□□ -0.5
SMN2-216ENST00000638794 RNF182Q8N6D2 247 aa11.95□□□□□ -0.5
SMN2-216ENST00000638794 GPR82Q96P67 336 aa11.95□□□□□ -0.5
SMN2-216ENST00000638794 STRAPQ9Y3F4 350 aaKnown RBP11.95□□□□□ -0.5
SMN2-216ENST00000638794 TRAV8-2A0A0B4J237 113 aa11.94□□□□□ -0.5
SMN2-216ENST00000638794 M0R2Z0 102 aa11.94□□□□□ -0.5
SMN2-216ENST00000638794 PRM2P04554 102 aa11.94□□□□□ -0.5
SMN2-216ENST00000638794 DAD1P61803 113 aa11.94□□□□□ -0.5
SMN2-216ENST00000638794 SPINK13Q1W4C9 94 aa11.94□□□□□ -0.5
SMN2-216ENST00000638794 Q6ZR54 194 aa11.94□□□□□ -0.5
SMN2-216ENST00000638794 TMEM144Q7Z5S9 345 aa11.94□□□□□ -0.5
SMN2-216ENST00000638794 OR11H7Q8NGC8 314 aa11.94□□□□□ -0.5
SMN2-216ENST00000638794 SLC25A39Q9BZJ4 359 aaPredicted RBP11.94□□□□□ -0.5
SMN2-216ENST00000638794 SMCO3A2RU48 225 aa11.93□□□□□ -0.5
SMN2-216ENST00000638794 H3BRN7 92 aa11.93□□□□□ -0.5
SMN2-216ENST00000638794 CRXO43186 299 aaPredicted RBP11.93□□□□□ -0.5
SMN2-216ENST00000638794 ADAP1O75689 374 aa11.93□□□□□ -0.5
SMN2-216ENST00000638794 DUSP14O95147 198 aaKnown RBP11.93□□□□□ -0.5
SMN2-216ENST00000638794 S100A7P31151 101 aa11.93□□□□□ -0.5
SMN2-216ENST00000638794 S100A5P33763 92 aa11.93□□□□□ -0.5
SMN2-216ENST00000638794 POLR2GP62487 172 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMN2-216ENST00000638794 FGL1Q08830 312 aa11.93□□□□□ -0.5
SMN2-216ENST00000638794 RNF212Q495C1 297 aa11.93□□□□□ -0.5
SMN2-216ENST00000638794 CYP2G1PQ6ZSU1 146 aa11.93□□□□□ -0.5
SMN2-216ENST00000638794 CCDC190Q86UF4 302 aa11.93□□□□□ -0.5
SMN2-216ENST00000638794 RYR1P21817 5038 aa11.92□□□□□ -0.5
SMN2-216ENST00000638794 C9orf170A2RU37 121 aa11.92□□□□□ -0.5
SMN2-216ENST00000638794 ZNF705GA8MUZ8 300 aaPredicted RBP11.92□□□□□ -0.5
SMN2-216ENST00000638794 INSP01308 110 aa11.92□□□□□ -0.5
SMN2-216ENST00000638794 IL5P05113 134 aa11.92□□□□□ -0.5
SMN2-216ENST00000638794 UBE2MP61081 183 aaKnown RBP11.92□□□□□ -0.5
SMN2-216ENST00000638794 ID3Q02535 119 aa11.92□□□□□ -0.5
SMN2-216ENST00000638794 BAP18Q8IXM2 172 aa11.92□□□□□ -0.5
SMN2-216ENST00000638794 SHANK2-AS3Q9BTD1 123 aa11.92□□□□□ -0.5
SMN2-216ENST00000638794 HIGD1AQ9Y241 93 aa11.92□□□□□ -0.5
SMN2-216ENST00000638794 MUC4Q99102 2169 aa11.91□□□□□ -0.5
SMN2-216ENST00000638794 PMS2P5A8MQ11 134 aa11.91□□□□□ -0.5
SMN2-216ENST00000638794 SSSCA1O60232 199 aa11.91□□□□□ -0.5
SMN2-216ENST00000638794 MED14OSP0DP75 135 aa11.91□□□□□ -0.5
SMN2-216ENST00000638794 RAP2BP61225 183 aa11.91□□□□□ -0.5
SMN2-216ENST00000638794 ZNF738Q8NE65 137 aa11.91□□□□□ -0.5
SMN2-216ENST00000638794 PSENENQ9NZ42 101 aa11.91□□□□□ -0.5
SMN2-216ENST00000638794 TRAV12-2A0A075B6T6 113 aa11.9□□□□□ -0.5
SMN2-216ENST00000638794 CCDC160A6NGH7 325 aa11.9□□□□□ -0.5
SMN2-216ENST00000638794 HYPMO75409 117 aa11.9□□□□□ -0.5
SMN2-216ENST00000638794 CCNKO75909 580 aa11.9□□□□□ -0.5
SMN2-216ENST00000638794 LINC00869P0C866 280 aa11.9□□□□□ -0.5
SMN2-216ENST00000638794 RPL7P18124 248 aaKnown RBP11.9□□□□□ -0.5
SMN2-216ENST00000638794 UHRF2Q96PU4 802 aa11.9□□□□□ -0.5
SMN2-216ENST00000638794 LYRM9A8MSI8 78 aa11.89□□□□□ -0.51
SMN2-216ENST00000638794 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
SMN2-216ENST00000638794 OR5G3P0C626 314 aa11.89□□□□□ -0.51
SMN2-216ENST00000638794 PLP1P60201 277 aa11.89□□□□□ -0.51
SMN2-216ENST00000638794 RRAS2P62070 204 aaPredicted RBP11.89□□□□□ -0.51
SMN2-216ENST00000638794 SRRQ9GZT4 340 aa11.89□□□□□ -0.51
SMN2-216ENST00000638794 FLVCR2Q9UPI3 526 aa11.89□□□□□ -0.51
SMN2-216ENST00000638794 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
SMN2-216ENST00000638794 NDUFB6O95139 128 aa11.88□□□□□ -0.51
SMN2-216ENST00000638794 CXCL3P19876 107 aa11.88□□□□□ -0.51
SMN2-216ENST00000638794 TSPOP30536 169 aa11.88□□□□□ -0.51
SMN2-216ENST00000638794 B2MP61769 119 aa11.88□□□□□ -0.51
SMN2-216ENST00000638794 SELENOTP62341 195 aa11.88□□□□□ -0.51
SMN2-216ENST00000638794 HIST1H1AQ02539 215 aaPredicted RBP11.88□□□□□ -0.51
SMN2-216ENST00000638794 SPANXN2Q5MJ10 180 aa11.88□□□□□ -0.51
SMN2-216ENST00000638794 C15orf53Q8NAA6 179 aa11.88□□□□□ -0.51
SMN2-216ENST00000638794 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
SMN2-216ENST00000638794 A0A087X0K7 114 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 OR4E1P0C645 316 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 METTL15P1P0C7V9 234 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 DEFB130BP0DP73 79 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 DEFB130AP0DP74 79 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 PRB4P10163 310 aaPredicted RBP11.87□□□□□ -0.51
SMN2-216ENST00000638794 AZU1P20160 251 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 DLK1P80370 383 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 BAK1Q16611 211 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 SOHLH1Q5JUK2 328 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 TMEM14EPQ6UXP3 125 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 OR8A1Q8NGG7 326 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 ARL6Q9H0F7 186 aa11.87□□□□□ -0.51
SMN2-216ENST00000638794 NAP1L6A6NFF2 107 aa11.86□□□□□ -0.51
SMN2-216ENST00000638794 INPP1P49441 399 aa11.86□□□□□ -0.51
SMN2-216ENST00000638794 RHOBP62745 196 aa11.86□□□□□ -0.51
SMN2-216ENST00000638794 SLC38A11Q08AI6 406 aa11.86□□□□□ -0.51
SMN2-216ENST00000638794 FCN2Q15485 313 aa11.86□□□□□ -0.51
SMN2-216ENST00000638794 PSG3Q16557 428 aa11.86□□□□□ -0.51
SMN2-216ENST00000638794 C1orf134Q5TEV5 83 aa11.86□□□□□ -0.51
SMN2-216ENST00000638794 TRIQKQ629K1 86 aa11.86□□□□□ -0.51
SMN2-216ENST00000638794 PATE2Q6UY27 113 aa11.86□□□□□ -0.51
SMN2-216ENST00000638794 LINC01587Q99440 93 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms