RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 RPRMQ9NS64 109 aa14.99□□□□□ -0.01
PDLIM2-221ENST00000622702 UMAD1C9J7I0 102 aa14.98□□□□□ -0.01
PDLIM2-221ENST00000622702 RHOBP62745 196 aa14.98□□□□□ -0.01
PDLIM2-221ENST00000622702 DEFB114Q30KQ6 69 aa14.98□□□□□ -0.01
PDLIM2-221ENST00000622702 MORN5Q5VZ52 161 aa14.98□□□□□ -0.01
PDLIM2-221ENST00000622702 RPP25LQ8N5L8 163 aaKnown RBP14.98□□□□□ -0.01
PDLIM2-221ENST00000622702 GPR61Q9BZJ8 451 aa14.98□□□□□ -0.01
PDLIM2-221ENST00000622702 PLA2G2EQ9NZK7 142 aa14.98□□□□□ -0.01
PDLIM2-221ENST00000622702 FUT9Q9Y231 359 aa14.98□□□□□ -0.01
PDLIM2-221ENST00000622702 WIPF1O43516 503 aa14.97□□□□□ -0.01
PDLIM2-221ENST00000622702 IGLV1-51P01701 117 aa14.97□□□□□ -0.01
PDLIM2-221ENST00000622702 CD5P06127 495 aa14.97□□□□□ -0.01
PDLIM2-221ENST00000622702 LEMD1Q68G75 181 aa14.97□□□□□ -0.01
PDLIM2-221ENST00000622702 DNAH3Q8TD57 4116 aa14.96□□□□□ -0.01
PDLIM2-221ENST00000622702 SPATA31B1PQ5VZV4 182 aa14.96□□□□□ -0.01
PDLIM2-221ENST00000622702 FAM90A2PQ658T7 463 aa14.96□□□□□ -0.01
PDLIM2-221ENST00000622702 MIR17HGQ75NE6 70 aa14.96□□□□□ -0.01
PDLIM2-221ENST00000622702 OR8I2Q8N0Y5 310 aa14.96□□□□□ -0.01
PDLIM2-221ENST00000622702 GPR82Q96P67 336 aa14.96□□□□□ -0.01
PDLIM2-221ENST00000622702 SLC25A22Q9H936 323 aa14.96□□□□□ -0.01
PDLIM2-221ENST00000622702 A0A1W2PPV4 95 aa14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 FAM122CQ6P4D5 195 aa14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 OR2K2Q8NGT1 345 aa14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 HELTA6NFD8 242 aa14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 RPL7P18124 248 aaKnown RBP14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 CDC34P49427 236 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 CD300EQ496F6 205 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 TCF24Q7RTU0 167 aa14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 FAM167A-AS1Q96KT0 104 aa14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 ACTR3CQ9C0K3 210 aaPredicted RBP14.95□□□□□ -0.02
PDLIM2-221ENST00000622702 TRAV5A0A0B4J249 113 aa14.94□□□□□ -0.02
PDLIM2-221ENST00000622702 TRAV25A0A0B4J276 109 aa14.94□□□□□ -0.02
PDLIM2-221ENST00000622702 PRB2P02812 416 aaPredicted RBP14.94□□□□□ -0.02
PDLIM2-221ENST00000622702 RAB5CP51148 216 aa14.94□□□□□ -0.02
PDLIM2-221ENST00000622702 DPPA3Q6W0C5 159 aa14.94□□□□□ -0.02
PDLIM2-221ENST00000622702 SIGLEC15Q6ZMC9 328 aa14.94□□□□□ -0.02
PDLIM2-221ENST00000622702 TMEM61Q8N0U2 210 aa14.94□□□□□ -0.02
PDLIM2-221ENST00000622702 MRPS12O15235 138 aaKnown RBP14.93□□□□□ -0.02
PDLIM2-221ENST00000622702 SULT1A2P50226 295 aa14.93□□□□□ -0.02
PDLIM2-221ENST00000622702 TAS2R45P59539 299 aa14.93□□□□□ -0.02
PDLIM2-221ENST00000622702 BPIFA4PQ86YQ2 179 aa14.93□□□□□ -0.02
PDLIM2-221ENST00000622702 RAB24Q969Q5 203 aa14.93□□□□□ -0.02
PDLIM2-221ENST00000622702 SLC25A2Q9BXI2 301 aa14.93□□□□□ -0.02
PDLIM2-221ENST00000622702 TMEM14CQ9P0S9 112 aa14.93□□□□□ -0.02
PDLIM2-221ENST00000622702 SELENOKQ9Y6D0 94 aa14.93□□□□□ -0.02
PDLIM2-221ENST00000622702 TSPAN4O14817 238 aa14.92□□□□□ -0.02
PDLIM2-221ENST00000622702 GALR1P47211 349 aa14.92□□□□□ -0.02
PDLIM2-221ENST00000622702 KRTAP10-11P60412 298 aa14.92□□□□□ -0.02
PDLIM2-221ENST00000622702 ZNF726P1Q15940 193 aa14.92□□□□□ -0.02
PDLIM2-221ENST00000622702 ALKAL2Q6UX46 152 aa14.92□□□□□ -0.02
PDLIM2-221ENST00000622702 STXBP6Q8NFX7 210 aa14.92□□□□□ -0.02
PDLIM2-221ENST00000622702 CTXND1A0A1B0GTU2 59 aa14.91□□□□□ -0.02
PDLIM2-221ENST00000622702 GP9P14770 177 aa14.91□□□□□ -0.02
PDLIM2-221ENST00000622702 FHITP49789 147 aa14.91□□□□□ -0.02
PDLIM2-221ENST00000622702 EGFEM1PQ0D2K5 195 aa14.91□□□□□ -0.02
PDLIM2-221ENST00000622702 KHDC3LQ587J8 217 aa14.91□□□□□ -0.02
PDLIM2-221ENST00000622702 RBPMS2Q6ZRY4 209 aaKnown RBP14.91□□□□□ -0.02
PDLIM2-221ENST00000622702 SMAD5-AS1Q9Y6J3 95 aa14.91□□□□□ -0.02
PDLIM2-221ENST00000622702 STAG3L2P0CL84 134 aa14.9□□□□□ -0.02
PDLIM2-221ENST00000622702 STAG3L3P0CL85 134 aa14.9□□□□□ -0.02
PDLIM2-221ENST00000622702 LCN12Q6JVE5 192 aa14.9□□□□□ -0.02
PDLIM2-221ENST00000622702 TEX261Q6UWH6 196 aa14.9□□□□□ -0.02
PDLIM2-221ENST00000622702 PQLC2Q6ZP29 291 aa14.9□□□□□ -0.02
PDLIM2-221ENST00000622702 SSX7Q7RTT5 188 aa14.9□□□□□ -0.02
PDLIM2-221ENST00000622702 FAM213BQ8TBF2 198 aa14.9□□□□□ -0.02
PDLIM2-221ENST00000622702 SORL1Q92673 2214 aa14.9□□□□□ -0.02
PDLIM2-221ENST00000622702 A0A087X0K7 114 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 IZUMO1RA6ND01 250 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 EIF3GO75821 320 aaKnown RBP eCLIP14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 IGLC2P0DOY2 106 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 RPL11P62913 178 aaKnown RBP14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 FAM74A1Q5RGS3 127 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 ZNF503Q96F45 646 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 SPAG8Q99932 426 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 OR51M1Q9H341 326 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 NRN1Q9NPD7 142 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 OR7C2O60412 319 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 MEOX2P50222 304 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 RNF141Q8WVD5 230 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 C17orf77Q96MU5 243 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 PAXXQ9BUH6 204 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 MS4A6AQ9H2W1 248 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 HRH4Q9H3N8 390 aa14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 AURKAIP1Q9NWT8 199 aaPredicted RBP14.89□□□□□ -0.03
PDLIM2-221ENST00000622702 TRAV2A0A0B4J234 112 aa14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 ZNF785A8K8V0 405 aa14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 HMGB3O15347 200 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 PYYP10082 97 aa14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 HIST1H1EP10412 219 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 ATF4P18848 351 aaPredicted RBP14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 PAFAH1B2P68402 229 aa14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 ZNF680Q8NEM1 530 aa14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 MBD3L1Q8WWY6 194 aa14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 ZMAT5Q9UDW3 170 aaKnown RBP14.88□□□□□ -0.03
PDLIM2-221ENST00000622702 IGKV3-7A0A075B6H7 116 aa14.87□□□□□ -0.03
PDLIM2-221ENST00000622702 MAP1LC3B2A6NCE7 125 aa14.87□□□□□ -0.03
PDLIM2-221ENST00000622702 ARL14EPLP0DKL9 152 aa14.87□□□□□ -0.03
PDLIM2-221ENST00000622702 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.87□□□□□ -0.03
PDLIM2-221ENST00000622702 DCANP1Q8TF63 244 aa14.87□□□□□ -0.03
PDLIM2-221ENST00000622702 FXYD5Q96DB9 178 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms