RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 LRRC10Q5BKY1 277 aa12.58□□□□□ -0.4
NPHP4-211ENST00000622020 RBPMS2Q6ZRY4 209 aaKnown RBP12.58□□□□□ -0.4
NPHP4-211ENST00000622020 FBXL15Q9H469 300 aa12.58□□□□□ -0.4
NPHP4-211ENST00000622020 HSBP1L1C9JCN9 74 aa12.57□□□□□ -0.4
NPHP4-211ENST00000622020 MRGPRG-AS1Q2M3A8 158 aa12.57□□□□□ -0.4
NPHP4-211ENST00000622020 TMEM108Q6UXF1 575 aa12.57□□□□□ -0.4
NPHP4-211ENST00000622020 PRSS33Q8NF86 280 aa12.57□□□□□ -0.4
NPHP4-211ENST00000622020 TMEM186Q96B77 213 aa12.57□□□□□ -0.4
NPHP4-211ENST00000622020 LTAP01374 205 aa12.57□□□□□ -0.4
NPHP4-211ENST00000622020 ATP5L2Q7Z4Y8 100 aa12.57□□□□□ -0.4
NPHP4-211ENST00000622020 PRSS22Q9GZN4 317 aa12.57□□□□□ -0.4
NPHP4-211ENST00000622020 FAM106CPP0CH98 169 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 PLGLAQ15195 96 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 FAM106AQ4KMX7 169 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 SLC25A34Q6PIV7 304 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 C19orf71A6NCJ1 209 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 TMEM178BH3BS89 294 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 STXBP6Q8NFX7 210 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 MAP1LC3CQ9BXW4 147 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 KLF12Q9Y4X4 402 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.56□□□□□ -0.4
NPHP4-211ENST00000622020 SERTM2A0A1B0GWG4 89 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 M0R3E3 92 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 AMMECR1LQ6DCA0 310 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 TMEM116Q8NCL8 245 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 FMC1Q96HJ9 113 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 HIGD1AQ9Y241 93 aa12.56□□□□□ -0.4
NPHP4-211ENST00000622020 APOHP02749 345 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-211ENST00000622020 LOXP28300 417 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-211ENST00000622020 MEF2CQ06413 473 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-211ENST00000622020 KLF17Q5JT82 389 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-211ENST00000622020 NCR2O95944 276 aa12.55□□□□□ -0.4
NPHP4-211ENST00000622020 UQCRFS1P47985 274 aa12.55□□□□□ -0.4
NPHP4-211ENST00000622020 C8orf46Q8TAG6 207 aa12.55□□□□□ -0.4
NPHP4-211ENST00000622020 NAA38Q9BRA0 125 aaKnown RBP12.55□□□□□ -0.4
NPHP4-211ENST00000622020 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
NPHP4-211ENST00000622020 Q86TA4 180 aa12.54□□□□□ -0.4
NPHP4-211ENST00000622020 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
NPHP4-211ENST00000622020 SLC25A39Q9BZJ4 359 aaPredicted RBP12.54□□□□□ -0.4
NPHP4-211ENST00000622020 INSIG2Q9Y5U4 225 aa12.54□□□□□ -0.4
NPHP4-211ENST00000622020 TAX1BP3O14907 124 aa12.54□□□□□ -0.4
NPHP4-211ENST00000622020 IGHV1-8P0DP01 117 aa12.54□□□□□ -0.4
NPHP4-211ENST00000622020 BVES-AS1Q5T3Y7 98 aa12.54□□□□□ -0.4
NPHP4-211ENST00000622020 OR8A1Q8NGG7 326 aa12.54□□□□□ -0.4
NPHP4-211ENST00000622020 DYNLRB1Q9NP97 96 aa12.54□□□□□ -0.4
NPHP4-211ENST00000622020 PRSS3P2Q8NHM4 247 aa12.54□□□□□ -0.4
NPHP4-211ENST00000622020 CUL9Q8IWT3 2517 aa12.53□□□□□ -0.4
NPHP4-211ENST00000622020 LOXL1Q08397 574 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-211ENST00000622020 WFDC3Q8IUB2 231 aa12.53□□□□□ -0.4
NPHP4-211ENST00000622020 CST9LQ9H4G1 147 aa12.53□□□□□ -0.4
NPHP4-211ENST00000622020 CNIH1O95406 144 aa12.53□□□□□ -0.4
NPHP4-211ENST00000622020 TRGV9Q99603 122 aa12.53□□□□□ -0.4
NPHP4-211ENST00000622020 RASL11BQ9BPW5 248 aa12.53□□□□□ -0.4
NPHP4-211ENST00000622020 C16orf97H3BN30 126 aa12.52□□□□□ -0.4
NPHP4-211ENST00000622020 OR5AL1P0C617 328 aa12.52□□□□□ -0.4
NPHP4-211ENST00000622020 OR4A5Q8NH83 315 aa12.52□□□□□ -0.4
NPHP4-211ENST00000622020 CHCHD1Q96BP2 118 aaKnown RBP12.52□□□□□ -0.4
NPHP4-211ENST00000622020 TMEM133Q9H2Q1 129 aa12.52□□□□□ -0.4
NPHP4-211ENST00000622020 ST20Q9HBF5 79 aa12.52□□□□□ -0.4
NPHP4-211ENST00000622020 SIGLEC9Q9Y336 463 aa12.52□□□□□ -0.4
NPHP4-211ENST00000622020 SPTBN1Q01082 2364 aaKnown RBP12.52□□□□□ -0.41
NPHP4-211ENST00000622020 IGHV3OR16-8A0A075B7F1 116 aa12.52□□□□□ -0.41
NPHP4-211ENST00000622020 A0A0G2JNJ9 132 aa12.52□□□□□ -0.41
NPHP4-211ENST00000622020 ZNF785A8K8V0 405 aa12.52□□□□□ -0.41
NPHP4-211ENST00000622020 IGLV2-11P01706 119 aa12.52□□□□□ -0.41
NPHP4-211ENST00000622020 LIPFP07098 398 aa12.52□□□□□ -0.41
NPHP4-211ENST00000622020 Q9UFV3 132 aa12.52□□□□□ -0.41
NPHP4-211ENST00000622020 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.41
NPHP4-211ENST00000622020 CRYGCP07315 174 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 ARF6P62330 175 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 OCIAD2Q56VL3 154 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 PPP1R27Q86WC6 154 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 AP5S1Q9NUS5 200 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 TLN1Q9Y490 2541 aaKnown RBP12.51□□□□□ -0.41
NPHP4-211ENST00000622020 TRAV30A0A087WSZ9 112 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 MC5RP33032 325 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 IFI27P40305 119 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-211ENST00000622020 NEU4Q8WWR8 484 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-211ENST00000622020 C8orf49Q96NF6 230 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 A0A1B0GUT8 65 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 INS-IGF2F8WCM5 200 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 CRXO43186 299 aaPredicted RBP12.51□□□□□ -0.41
NPHP4-211ENST00000622020 IGLC1P0CG04 106 aa12.51□□□□□ -0.41
NPHP4-211ENST00000622020 FCGR2BP31994 310 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-211ENST00000622020 LGALS7P47929 136 aa12.5□□□□□ -0.41
NPHP4-211ENST00000622020 TMEM30BQ3MIR4 351 aa12.5□□□□□ -0.41
NPHP4-211ENST00000622020 SCRT2Q9NQ03 307 aa12.5□□□□□ -0.41
NPHP4-211ENST00000622020 AKAP6Q13023 2319 aa12.5□□□□□ -0.41
NPHP4-211ENST00000622020 THBDP07204 575 aa12.5□□□□□ -0.41
NPHP4-211ENST00000622020 IGFL4Q6B9Z1 124 aa12.5□□□□□ -0.41
NPHP4-211ENST00000622020 FA2HQ7L5A8 372 aa12.5□□□□□ -0.41
NPHP4-211ENST00000622020 NDFIP1Q9BT67 221 aa12.5□□□□□ -0.41
NPHP4-211ENST00000622020 TMEM213A2RRL7 107 aa12.49□□□□□ -0.41
NPHP4-211ENST00000622020 IGHV3-23P01764 117 aa12.49□□□□□ -0.41
NPHP4-211ENST00000622020 HLA-DRB1P01911 266 aa12.49□□□□□ -0.41
NPHP4-211ENST00000622020 F11RQ9Y624 299 aaKnown RBP12.49□□□□□ -0.41
NPHP4-211ENST00000622020 IGHV3-35A0A0C4DH35 117 aa12.49□□□□□ -0.41
NPHP4-211ENST00000622020 IL4P05112 153 aa12.49□□□□□ -0.41
NPHP4-211ENST00000622020 CRIP1P50238 77 aa12.49□□□□□ -0.41
NPHP4-211ENST00000622020 TMEM155Q4W5P6 130 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms