RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 HES4Q9HCC6 221 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 CSPG4Q6UVK1 2322 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 A0A1W2PRD5 423 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 A0A1W2PRF3 423 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 A0A1W2PRM7 423 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 FNDC10F2Z333 226 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 CHEK1O14757 476 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 LINC00694P0DN24 101 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 PRDX2P32119 198 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 DRAM1Q8N682 238 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 FAM216BQ8N7L0 139 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 NHLRC2Q8NBF2 726 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 PRELID3AQ96N28 172 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 MS4A6AQ9H2W1 248 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 RABAC1Q9UI14 185 aa4.52□□□□□ -1.69
CPNE4-214ENST00000617767 ZNF462Q96JM2 2506 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 CENPVL3A0A0U1RRI6 287 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 LY6HO94772 140 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 CXorf1O96002 111 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 LGALS4P56470 323 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 RPL30P62888 115 aaKnown RBP4.51□□□□□ -1.69
CPNE4-214ENST00000617767 AMTNQ6UX39 209 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 ZNF497Q6ZNH5 498 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 FAM19A5Q7Z5A7 132 aaPredicted RBP4.51□□□□□ -1.69
CPNE4-214ENST00000617767 TMEM116Q8NCL8 245 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 FAM57AQ8TBR7 257 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 C18orf12Q96KH6 178 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 C11orf1Q9H5F2 150 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 IL36BQ9NZH7 164 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 IGKV1D-17A0A075B6S4 117 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 C11orf94C9JXX5 98 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 COX8AP10176 69 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 CD40P25942 277 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 ERVK11-1P61568 191 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 GNB1P62873 340 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 RPL39P5Q59GN2 51 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 SPANXN5Q5MJ07 72 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 IGFL3Q6UXB1 125 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 SSX8Q7RTT4 187 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 GNB1LQ9BYB4 327 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 TMEM191AQ9H0A3 160 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 RAB9BQ9NP90 201 aa4.51□□□□□ -1.69
CPNE4-214ENST00000617767 PTPN13Q12923 2485 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 TMEM30CPA0ZSE6 113 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.5□□□□□ -1.69
CPNE4-214ENST00000617767 K7ERJ3 54 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 PLAUP00749 431 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 IGKV1-39P01597 117 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 IGLV2-14P01704 120 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 IGKV1D-39P04432 117 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 DEFA4P12838 97 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 TNFAIP6P98066 277 aaPredicted RBP4.5□□□□□ -1.69
CPNE4-214ENST00000617767 FOXI1Q12951 378 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 TMEM78Q5T7P6 136 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 DNAJC30Q96LL9 226 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 MSRB2Q9Y3D2 182 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 C17orf98A8MV24 154 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 C16orf97H3BN30 126 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 SYS1-DBNDD2H3BUS1 97 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 IGKV1D-33P01593 117 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 IGKV1-33P01594 117 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 IGLV1-44P01699 117 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 COL8A2P25067 703 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 ECI1P42126 302 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 CDSNQ15517 529 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 VWC2Q2TAL6 325 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 TTC32Q5I0X7 151 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 TMEM136Q6ZRR5 245 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 MMD2Q8IY49 270 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 RPP25LQ8N5L8 163 aaKnown RBP4.5□□□□□ -1.69
CPNE4-214ENST00000617767 OR10G7Q8NGN6 311 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 ZDHHC16Q969W1 377 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 SETD2Q9BYW2 2564 aaPredicted RBP4.5□□□□□ -1.69
CPNE4-214ENST00000617767 LINC00473A8K010 186 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 FCN3O75636 299 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 SMIM13P0DJ93 91 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 REG1BP48304 166 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 PSG5Q15238 335 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 GAGE13Q4V321 117 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 SIGLEC15Q6ZMC9 328 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 IGFBPL1Q8WX77 278 aa4.5□□□□□ -1.69
CPNE4-214ENST00000617767 H1FXQ92522 213 aaKnown RBP4.5□□□□□ -1.69
CPNE4-214ENST00000617767 TIMM8BQ9Y5J9 83 aaPredicted RBP4.5□□□□□ -1.69
CPNE4-214ENST00000617767 SOX21Q9Y651 276 aaPredicted RBP4.5□□□□□ -1.69
CPNE4-214ENST00000617767 TRBV20OR9-2A0A075B6H5 130 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 TRBV9A0A0B4J1U6 114 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 TRAV5A0A0B4J249 113 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A10PA6NDY2 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A18PA6NE21 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A16PA6NEW6 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A20PA6NIJ5 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A8PA6NJQ4 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A7PA6NKC0 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A22PA8MWA6 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A12PA8MX19 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A5PA8MXJ8 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A23PA8MXZ1 464 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FCGR3BO75015 233 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 IGKV1-5P01602 117 aa4.49□□□□□ -1.69
CPNE4-214ENST00000617767 FAM90A15PP0C7V4 464 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms