RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	TM2D1	Q9BX74	207 aa		10.1	□□□□□ -0.79
ABCA2-223	ENST00000614293	TMEM155	Q4W5P6	130 aa		10.1	□□□□□ -0.79
ABCA2-223	ENST00000614293	GFI1B	Q5VTD9	330 aa		10.1	□□□□□ -0.79
ABCA2-223	ENST00000614293	C5orf66	Q9H5L9	145 aa		10.1	□□□□□ -0.79
ABCA2-223	ENST00000614293	PSG8	Q9UQ74	426 aa		10.1	□□□□□ -0.79
ABCA2-223	ENST00000614293	SCO2	A0A1W2PP80	73 aa		10.1	□□□□□ -0.79
ABCA2-223	ENST00000614293	SMIM2	Q9BVW6	85 aa		10.1	□□□□□ -0.79
ABCA2-223	ENST00000614293	RHOD	O00212	210 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	CD24	P25063	80 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	FXYD7	P58549	80 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	FAM201A	Q5SY85	155 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	HEPN1	Q6WQI6	88 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	WFDC12	Q8WWY7	111 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	CHCHD1	Q96BP2	118 aa	Known RBP	10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	IGKV1-8	A0A0C4DH67	115 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	MLNR	O43193	412 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	FCN3	O75636	299 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	MSMB	P08118	114 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	DAZ1	Q9NQZ3	744 aa	Known RBP	10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	RNF223	E7ERA6	249 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	PMVK	Q15126	192 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	IL17REL	Q6ZVW7	336 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	GNB1L	Q9BYB4	327 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	CELA3A	P09093	270 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	ZNF497	Q6ZNH5	498 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	ATP5L2	Q7Z4Y8	100 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	TAL2	Q16559	108 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	HIST1H2BL	Q99880	126 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	LHFPL4	Q7Z7J7	247 aa		10.09	□□□□□ -0.79
ABCA2-223	ENST00000614293	LMO1	P25800	156 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	MRAP	Q8TCY5	172 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	GPHA2	Q96T91	129 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	SRSF8	Q9BRL6	282 aa	Known RBP	10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	LTBP1	Q14766	1721 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	CELA3B	P08861	270 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	NPC2	P61916	151 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	TRBV24-1	A0A075B6N3	115 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	GAGE12B	A1L429	117 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	MALRD1	Q5VYJ5	2156 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	ADAMTS9	Q9P2N4	1935 aa		10.08	□□□□□ -0.8
ABCA2-223	ENST00000614293	IGHV1-18	A0A0C4DH31	117 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	C17orf98	A8MV24	154 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293		A0A1W2PR77	199 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	EPOP	A6NHQ4	379 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	C1QL2	Q7Z5L3	287 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	PRIMA1	Q86XR5	153 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	MSRB2	Q9Y3D2	182 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	C1QL1	O75973	258 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	KLF5	Q13887	457 aa	Predicted RBP	10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	TMEM178B	H3BS89	294 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	SAMD5	Q5TGI4	173 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	EML5	Q05BV3	1969 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	NAV3	Q8IVL0	2385 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	TRBV5-7	A0A0A0MS05	114 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	CD160	O95971	181 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	CD300E	Q496F6	205 aa	Predicted RBP	10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	SPATA31B1P	Q5VZV4	182 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	NRTN	Q99748	197 aa		10.07	□□□□□ -0.8
ABCA2-223	ENST00000614293	ZNF479	Q96JC4	524 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293		H3BUT2	72 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	IGLV3-19	P01714	112 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	TFF3	Q07654	80 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	MIR17HG	Q75NE6	70 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	SPRR3	Q9UBC9	169 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	IGHG3	P01860	377 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	SMIM10L1	P0DMW3	83 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	SMIM10	Q96HG1	83 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	KIAA1671	Q9BY89	1806 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	IGHV1-8	P0DP01	117 aa		10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	TRPT1	Q86TN4	253 aa	Known RBP	10.06	□□□□□ -0.8
ABCA2-223	ENST00000614293	CHKB-CPT1B	H3BT56	60 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	TIMM21	Q9BVV7	248 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	DSCAM	O60469	2012 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	hADV29S1	A0JD25	119 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	IGHV1-46	P01743	117 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	TCRA	P04437	139 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	LINC00271	P0C7V0	271 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	LSM4	Q9Y4Z0	139 aa	Known RBP	10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	IGHV1-3	A0A0C4DH29	117 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	NPIPB5	A8MRT5	1133 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	CCL20	P78556	96 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	RCC1L	Q96I51	464 aa	Known RBP	10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	TRAV13-1	A0A0B4J241	112 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	SRP19	P09132	144 aa	Known RBP	10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	NBAS	A2RRP1	2371 aa		10.05	□□□□□ -0.8
ABCA2-223	ENST00000614293	C5orf64	Q2M2E5	130 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	FAM219B	Q5XKK7	198 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	BRD3OS	Q6XYD6	125 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	HIST3H2BB	Q8N257	126 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	PLXNB3	Q9ULL4	1909 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	LYNX1	G3V0Z9	82 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	LYNX1	P0DP58	116 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	SELL	P14151	372 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	AZU1	P20160	251 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	MST1L	Q2TV78	715 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	KIAA1549	Q9HCM3	1950 aa		10.04	□□□□□ -0.8
ABCA2-223	ENST00000614293	TRAV25	A0A0B4J276	109 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms