RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 A0A1W2PRF3 423 aa7.27□□□□□ -1.24
TTC28-208ENST00000612946 A0A1W2PRM7 423 aa7.27□□□□□ -1.24
TTC28-208ENST00000612946 PRSS46E5RG02 174 aa7.27□□□□□ -1.24
TTC28-208ENST00000612946 HGFACQ04756 655 aa7.27□□□□□ -1.24
TTC28-208ENST00000612946 V9GYY9 64 aa7.27□□□□□ -1.24
TTC28-208ENST00000612946 IGHV3-13P01766 116 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 FOXI2Q6ZQN5 318 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 Q71RC1 249 aaPredicted RBP7.27□□□□□ -1.25
TTC28-208ENST00000612946 PRRC2AP48634 2157 aaKnown RBP7.27□□□□□ -1.25
TTC28-208ENST00000612946 PRR32B1ATL7 298 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 LILRA1O75019 489 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 ANAPC10Q9UM13 185 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 SMIM10L1P0DMW3 83 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 PF4V1P10720 104 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 SLC25A53Q5H9E4 307 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 SMIM10Q96HG1 83 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 CCL7P80098 99 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 C11orf52Q96A22 123 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 DUSP14O95147 198 aaKnown RBP7.27□□□□□ -1.25
TTC28-208ENST00000612946 IL9P15248 144 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 Q8N8P6 123 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 C1QCP02747 245 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 CELA2BP08218 269 aaPredicted RBP7.27□□□□□ -1.25
TTC28-208ENST00000612946 MAFAQ8NHW3 353 aaPredicted RBP7.27□□□□□ -1.25
TTC28-208ENST00000612946 IGLL1P15814 213 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 RNF5Q99942 180 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 PRSS47A8MTI9 375 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 TMEM196Q5HYL7 178 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 Q6ZS52 159 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 LIME1Q9H400 295 aa7.27□□□□□ -1.25
TTC28-208ENST00000612946 HRKO00198 91 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 EFEMP2O95967 443 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 PRR33A8MZF0 331 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 PLAURQ03405 335 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 F8VRH5 84 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 JPT2Q9H910 190 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 SPSB3Q6PJ21 355 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 Q86TA4 180 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 TRAV8-3A0A0A6YYJ7 113 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 HLA-DRB4P13762 266 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 HTN1P15515 57 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 FAM219BQ5XKK7 198 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 MRPL55Q7Z7F7 128 aaKnown RBP7.26□□□□□ -1.25
TTC28-208ENST00000612946 HLA-DRB4X5D2U9 266 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 FOXS1O43638 330 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 IGFBPL1Q8WX77 278 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 GFRALQ6UXV0 394 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 C8orf86Q6ZUL3 223 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 RNASE8Q8TDE3 154 aaKnown RBP7.26□□□□□ -1.25
TTC28-208ENST00000612946 AHRRA9YTQ3 701 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 HOXD3P31249 432 aaPredicted RBP7.26□□□□□ -1.25
TTC28-208ENST00000612946 TTC28Q96AY4 2481 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 C16orf97H3BN30 126 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 FOXG1P55316 489 aaPredicted RBP7.26□□□□□ -1.25
TTC28-208ENST00000612946 IL17RELQ6ZVW7 336 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 TMEM243Q9BU79 118 aa7.26□□□□□ -1.25
TTC28-208ENST00000612946 F8WEM9 126 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 MRPL14Q6P1L8 145 aaKnown RBP7.25□□□□□ -1.25
TTC28-208ENST00000612946 IGHV3OR15-7A0A075B7D8 119 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 PEBP1P30086 187 aaKnown RBP7.25□□□□□ -1.25
TTC28-208ENST00000612946 ANKHD1Q8IWZ3 2542 aaKnown RBP7.25□□□□□ -1.25
TTC28-208ENST00000612946 PYGO2Q9BRQ0 406 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 IGLV3-32A0A0A0MS00 114 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 DEFB109BQ30KR1 87 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 FAM214BQ7L5A3 538 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 PPP1R32Q7Z5V6 425 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 DTX2Q86UW9 622 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 KLF14Q8TD94 323 aaPredicted RBP7.25□□□□□ -1.25
TTC28-208ENST00000612946 NAA38Q9BRA0 125 aaKnown RBP7.25□□□□□ -1.25
TTC28-208ENST00000612946 ATP5EP2Q5VTU8 51 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 NPIPB5A8MRT5 1133 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 CCL3P10147 92 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 GNG5P63218 68 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 ZNF329Q86UD4 541 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 TMEM158Q8WZ71 300 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 PLA2G3Q9NZ20 509 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 CELA3AP09093 270 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 RPL39P5Q59GN2 51 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 SMRP1Q8NCR6 262 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 PEMTQ9UBM1 199 aa7.25□□□□□ -1.25
TTC28-208ENST00000612946 FAM104BQ5XKR9 115 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 PRADC1Q9BSG0 188 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 IGLC1P0CG04 106 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 RNASE4P34096 147 aaKnown RBP7.24□□□□□ -1.25
TTC28-208ENST00000612946 CCL13Q99616 98 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 IGHV3-21A0A0B4J1V1 117 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 TEX48A0A1B0GUV7 120 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 SAA2P0DJI9 122 aaPredicted RBP7.24□□□□□ -1.25
TTC28-208ENST00000612946 WFDC3Q8IUB2 231 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 PAQR4Q8N4S7 273 aaPredicted RBP7.24□□□□□ -1.25
TTC28-208ENST00000612946 FAM60AQ9NP50 221 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 ZFYVE26Q68DK2 2539 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 MYO9AB2RTY4 2548 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 TRAV26-1A0A087WT03 109 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 IGKV3-11P04433 115 aa7.24□□□□□ -1.25
TTC28-208ENST00000612946 NDUFV3P56181 108 aaKnown RBP7.24□□□□□ -1.25
TTC28-208ENST00000612946 CARD19Q96LW7 228 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 C1QL2Q7Z5L3 287 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 A0A0J9YW62 118 aa7.23□□□□□ -1.25
TTC28-208ENST00000612946 QRFPP83859 136 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms