RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 EXOC3-AS1Q8N2X6 119 aa7.96□□□□□ -1.14
CSMD1-217ENST00000602723 CITED2Q99967 270 aaPredicted RBP7.96□□□□□ -1.14
CSMD1-217ENST00000602723 hDV102S1A0JD36 115 aa7.96□□□□□ -1.14
CSMD1-217ENST00000602723 RPL15P61313 204 aaKnown RBP7.96□□□□□ -1.14
CSMD1-217ENST00000602723 PIEZO2Q9H5I5 2752 aa7.96□□□□□ -1.14
CSMD1-217ENST00000602723 HIVEP2P31629 2446 aa7.96□□□□□ -1.14
CSMD1-217ENST00000602723 WBP1Q96G27 269 aa7.96□□□□□ -1.14
CSMD1-217ENST00000602723 C15orf32Q32M92 178 aa7.96□□□□□ -1.14
CSMD1-217ENST00000602723 ZNF415Q09FC8 603 aa7.96□□□□□ -1.14
CSMD1-217ENST00000602723 OVOL1O14753 267 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 C1orf122Q6ZSJ8 110 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 OR10W1Q8NGF6 305 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 LRRK2Q5S007 2527 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 CD24P25063 80 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 PAX8Q06710 450 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 A0A0A6YYD4 124 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 LCN12Q6JVE5 192 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 LINC01551Q86U37 167 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 VSIRQ9H7M9 311 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 LHX2P50458 406 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 LYZL4Q96KX0 146 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 IGKV1-9A0A0C4DH69 117 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 SPINK8P0C7L1 97 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 MRPL52Q86TS9 123 aaKnown RBP7.95□□□□□ -1.14
CSMD1-217ENST00000602723 RPRMLQ8N4K4 120 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 GGTLC1Q9BX51 225 aa7.95□□□□□ -1.14
CSMD1-217ENST00000602723 SLC25A39Q9BZJ4 359 aaPredicted RBP7.95□□□□□ -1.14
CSMD1-217ENST00000602723 UBE2V1Q13404 147 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 TEX43Q6ZNM6 134 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 TGFBR3LH3BV60 316 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 ID3Q02535 119 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 TREML4Q6UXN2 200 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 NUP35Q8NFH5 326 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 GAGE12BA1L429 117 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 PRB4P10163 310 aaPredicted RBP7.94□□□□□ -1.14
CSMD1-217ENST00000602723 LHFPL4Q7Z7J7 247 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 GLRX5Q86SX6 157 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 KIAA1671Q9BY89 1806 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 IGHV3-73A0A0B4J1V6 119 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 SYS1-DBNDD2H3BUS1 97 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 PMS2P5A8MQ11 134 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 ZNF319Q9P2F9 582 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 J3QRE1 110 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 ADAMTSL5Q6ZMM2 481 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 TRGV9Q99603 122 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 AGMATQ9BSE5 352 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 COX11Q9Y6N1 276 aa7.94□□□□□ -1.14
CSMD1-217ENST00000602723 F8WEM9 126 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 DLEU1O43261 78 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 MBNL3Q9NUK0 354 aaKnown RBP7.93□□□□□ -1.14
CSMD1-217ENST00000602723 IGKV1D-8A0A087WSZ0 117 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 GAGE2AQ6NT46 116 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 SRRM4A7MD48 611 aaKnown RBP7.93□□□□□ -1.14
CSMD1-217ENST00000602723 SP9P0CG40 484 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 EPOPA6NHQ4 379 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 PSG1P11464 419 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 TIMM23O14925 209 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 ERCC8Q13216 396 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 TMEM256Q8N2U0 113 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 C9orf106Q8NAJ2 232 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 PRADC1Q9BSG0 188 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 ZNF474Q6S9Z5 364 aaPredicted RBP7.93□□□□□ -1.14
CSMD1-217ENST00000602723 ABHD17AQ96GS6 310 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 DPH3P1Q9H4G8 78 aa7.93□□□□□ -1.14
CSMD1-217ENST00000602723 TFF1P04155 84 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 SRSF7Q16629 238 aaKnown RBP eCLIP7.92□□□□□ -1.14
CSMD1-217ENST00000602723 ASCL4Q6XD76 172 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 WFDC12Q8WWY7 111 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 VWC2LB2RUY7 222 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 MAJINQ3KP22 176 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 PRR31Q5SQ13 230 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 LYZL1Q6UWQ5 148 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 GFI1Q99684 422 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 TMEM8BA6NDV4 472 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 MPV17L2Q567V2 206 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 TIMM21Q9BVV7 248 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 MRPS18CQ9Y3D5 142 aaKnown RBP7.92□□□□□ -1.14
CSMD1-217ENST00000602723 SPATA31B1PQ5VZV4 182 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 CD33P20138 364 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 A0A087WX48 190 aa7.92□□□□□ -1.14
CSMD1-217ENST00000602723 PRSS22Q9GZN4 317 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 CSTL1Q9H114 145 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 SCRT1Q9BWW7 348 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 WDR83OSQ9Y284 106 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 FXYD7P58549 80 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 RASL10AQ92737 203 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 KLF12Q9Y4X4 402 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 COL4A5P29400 1685 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 VCYO14598 125 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 THBDP07204 575 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 FAM166AQ6J272 317 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 RCHY1Q96PM5 261 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 INS-IGF2F8WCM5 200 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 INSP01308 110 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 WNT2P09544 360 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 LSM4Q9Y4Z0 139 aaKnown RBP7.91□□□□□ -1.14
CSMD1-217ENST00000602723 TRAV8-3A0A0A6YYJ7 113 aa7.91□□□□□ -1.14
CSMD1-217ENST00000602723 SUPT4H1P63272 117 aaKnown RBP7.91□□□□□ -1.14
CSMD1-217ENST00000602723 RNASE6Q93091 150 aaKnown RBP7.91□□□□□ -1.14
CSMD1-217ENST00000602723 REG4Q9BYZ8 158 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms