RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 Q8NAQ8 132 aa12.71□□□□□ -0.37
IRF3-230ENST00000601809 OR11H2Q8NH07 326 aa12.71□□□□□ -0.37
IRF3-230ENST00000601809 GPR82Q96P67 336 aa12.71□□□□□ -0.37
IRF3-230ENST00000601809 UHRF2Q96PU4 802 aa12.71□□□□□ -0.37
IRF3-230ENST00000601809 NMES1Q9C002 83 aa12.71□□□□□ -0.37
IRF3-230ENST00000601809 SAV1Q9H4B6 383 aaPredicted RBP12.71□□□□□ -0.37
IRF3-230ENST00000601809 HIGD1AQ9Y241 93 aa12.71□□□□□ -0.37
IRF3-230ENST00000601809 TRAV8-2A0A0B4J237 113 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 GOSR2O14653 212 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 PVALBP20472 110 aaPredicted RBP12.7□□□□□ -0.38
IRF3-230ENST00000601809 GALR1P47211 349 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 MEOX2P50222 304 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 BCAP31P51572 246 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 DEFA1P59665 94 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 DEFA3P59666 94 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 PRR20EP86478 221 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 PRR20CP86479 221 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 PRR20DP86480 221 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 PRR20BP86481 221 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 PRR20AP86496 221 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 PXDC1Q5TGL8 231 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 FOXI2Q6ZQN5 318 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 ZNF546Q86UE3 836 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 RSG1Q9BU20 258 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 ARL6Q9H0F7 186 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 X6R8D5 127 aa12.7□□□□□ -0.38
IRF3-230ENST00000601809 LCE6AA0A183 80 aa12.69□□□□□ -0.38
IRF3-230ENST00000601809 ID1P41134 155 aa12.69□□□□□ -0.38
IRF3-230ENST00000601809 RAP2BP61225 183 aa12.69□□□□□ -0.38
IRF3-230ENST00000601809 SAMD13Q5VXD3 122 aa12.69□□□□□ -0.38
IRF3-230ENST00000601809 TMEM217Q8N7C4 229 aa12.69□□□□□ -0.38
IRF3-230ENST00000601809 CHAC2Q8WUX2 184 aa12.69□□□□□ -0.38
IRF3-230ENST00000601809 TMEM37Q8WXS4 190 aa12.69□□□□□ -0.38
IRF3-230ENST00000601809 ARV1Q9H2C2 271 aa12.69□□□□□ -0.38
IRF3-230ENST00000601809 OR5AC2Q9NZP5 309 aa12.69□□□□□ -0.38
IRF3-230ENST00000601809 A0A087X0K7 114 aa12.68□□□□□ -0.38
IRF3-230ENST00000601809 A0A0J9YX75 114 aa12.68□□□□□ -0.38
IRF3-230ENST00000601809 S100A11P31949 105 aa12.68□□□□□ -0.38
IRF3-230ENST00000601809 MORN5Q5VZ52 161 aa12.68□□□□□ -0.38
IRF3-230ENST00000601809 ZNF709Q8N972 641 aa12.68□□□□□ -0.38
IRF3-230ENST00000601809 UQCC1Q9NVA1 299 aa12.68□□□□□ -0.38
IRF3-230ENST00000601809 F6UB75 175 aa12.67□□□□□ -0.38
IRF3-230ENST00000601809 OR5G3P0C626 314 aa12.67□□□□□ -0.38
IRF3-230ENST00000601809 RBMY1A1P0DJD3 496 aaKnown RBP12.67□□□□□ -0.38
IRF3-230ENST00000601809 RBMY1CP0DJD4 496 aa12.67□□□□□ -0.38
IRF3-230ENST00000601809 RPL7P18124 248 aaKnown RBP12.67□□□□□ -0.38
IRF3-230ENST00000601809 S100A7P31151 101 aa12.67□□□□□ -0.38
IRF3-230ENST00000601809 CAMLGP49069 296 aa12.67□□□□□ -0.38
IRF3-230ENST00000601809 RBMY1FQ15415 496 aaKnown RBP12.67□□□□□ -0.38
IRF3-230ENST00000601809 LINC00052Q96N35 136 aa12.67□□□□□ -0.38
IRF3-230ENST00000601809 RNF126Q9BV68 326 aa12.67□□□□□ -0.38
IRF3-230ENST00000601809 CLEC5AQ9NY25 188 aa12.67□□□□□ -0.38
IRF3-230ENST00000601809 NHLH2Q02577 135 aa12.66□□□□□ -0.38
IRF3-230ENST00000601809 OPCMLQ14982 345 aa12.66□□□□□ -0.38
IRF3-230ENST00000601809 SPATA31B1PQ5VZV4 182 aa12.66□□□□□ -0.38
IRF3-230ENST00000601809 MIC13Q5XKP0 118 aa12.66□□□□□ -0.38
IRF3-230ENST00000601809 AMTNQ6UX39 209 aa12.66□□□□□ -0.38
IRF3-230ENST00000601809 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
IRF3-230ENST00000601809 E5RGE8 158 aa12.65□□□□□ -0.38
IRF3-230ENST00000601809 RPL29P47914 159 aaKnown RBP12.65□□□□□ -0.38
IRF3-230ENST00000601809 CYCSP99999 105 aaKnown RBP12.65□□□□□ -0.38
IRF3-230ENST00000601809 ATP6V1FQ16864 119 aa12.65□□□□□ -0.38
IRF3-230ENST00000601809 IGFL4Q6B9Z1 124 aa12.65□□□□□ -0.38
IRF3-230ENST00000601809 ZNF705AQ6ZN79 300 aaPredicted RBP12.65□□□□□ -0.38
IRF3-230ENST00000601809 LINC00305Q7Z4B0 112 aa12.65□□□□□ -0.38
IRF3-230ENST00000601809 STX12Q86Y82 276 aa12.65□□□□□ -0.38
IRF3-230ENST00000601809 ELOA3CA0A087WX78 387 aaPredicted RBP12.64□□□□□ -0.39
IRF3-230ENST00000601809 IGHV4-28A0A0C4DH34 117 aa12.64□□□□□ -0.39
IRF3-230ENST00000601809 UBE2L5PA0A1B0GUS4 154 aa12.64□□□□□ -0.39
IRF3-230ENST00000601809 DEFB4AO15263 64 aa12.64□□□□□ -0.39
IRF3-230ENST00000601809 HBG1P69891 147 aa12.64□□□□□ -0.39
IRF3-230ENST00000601809 HBG2P69892 147 aa12.64□□□□□ -0.39
IRF3-230ENST00000601809 FAM78BQ5VT40 261 aa12.64□□□□□ -0.39
IRF3-230ENST00000601809 PPP1R1CQ8WVI7 109 aa12.64□□□□□ -0.39
IRF3-230ENST00000601809 RPRMQ9NS64 109 aa12.64□□□□□ -0.39
IRF3-230ENST00000601809 XCL2Q9UBD3 114 aa12.64□□□□□ -0.39
IRF3-230ENST00000601809 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
IRF3-230ENST00000601809 PTTG1O95997 202 aa12.63□□□□□ -0.39
IRF3-230ENST00000601809 ZNF705DP0CH99 300 aaPredicted RBP12.63□□□□□ -0.39
IRF3-230ENST00000601809 ZNF705BP0CI00 300 aaPredicted RBP12.63□□□□□ -0.39
IRF3-230ENST00000601809 MIFP14174 115 aa12.63□□□□□ -0.39
IRF3-230ENST00000601809 CXCL3P19876 107 aa12.63□□□□□ -0.39
IRF3-230ENST00000601809 NUTF2P61970 127 aaKnown RBP12.63□□□□□ -0.39
IRF3-230ENST00000601809 LRRC37A5PQ49AS3 106 aa12.63□□□□□ -0.39
IRF3-230ENST00000601809 RNF182Q8N6D2 247 aa12.63□□□□□ -0.39
IRF3-230ENST00000601809 C1QTNF4Q9BXJ3 329 aa12.63□□□□□ -0.39
IRF3-230ENST00000601809 SLC35B3Q9H1N7 401 aa12.63□□□□□ -0.39
IRF3-230ENST00000601809 VPS13DQ5THJ4 4388 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 MPC2O95563 127 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 IGKV3-20P01619 116 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 RLN2P04090 185 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 IGLC2P0DOY2 106 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 HLA-DMBP28068 263 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 RAB31Q13636 194 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 PMS2P11Q13670 270 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 CEMP1Q6PRD7 247 aaPredicted RBP12.62□□□□□ -0.39
IRF3-230ENST00000601809 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 OR5C1Q8NGR4 320 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 NEU1Q99519 415 aa12.62□□□□□ -0.39
IRF3-230ENST00000601809 DNAJC4Q9NNZ3 241 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms