RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ORM2P19652 201 aa12.69□□□□□ -0.38
CHMP2A-208ENST00000601220 VAMP1P23763 118 aa12.69□□□□□ -0.38
CHMP2A-208ENST00000601220 FAUP35544 74 aaKnown RBP12.69□□□□□ -0.38
CHMP2A-208ENST00000601220 CNN1P51911 297 aaKnown RBP12.69□□□□□ -0.38
CHMP2A-208ENST00000601220 TOMM5Q8N4H5 51 aa12.69□□□□□ -0.38
CHMP2A-208ENST00000601220 BPIFCQ8NFQ6 507 aa12.69□□□□□ -0.38
CHMP2A-208ENST00000601220 OR1B1Q8NGR6 318 aa12.69□□□□□ -0.38
CHMP2A-208ENST00000601220 SLC25A21Q9BQT8 299 aaPredicted RBP12.69□□□□□ -0.38
CHMP2A-208ENST00000601220 PLAC8L1A1L4L8 177 aa12.68□□□□□ -0.38
CHMP2A-208ENST00000601220 DAD1P61803 113 aa12.68□□□□□ -0.38
CHMP2A-208ENST00000601220 RPP30P78346 268 aaKnown RBP12.68□□□□□ -0.38
CHMP2A-208ENST00000601220 ID3Q02535 119 aa12.68□□□□□ -0.38
CHMP2A-208ENST00000601220 SPANXN5Q5MJ07 72 aa12.68□□□□□ -0.38
CHMP2A-208ENST00000601220 RNF182Q8N6D2 247 aa12.68□□□□□ -0.38
CHMP2A-208ENST00000601220 GPR82Q96P67 336 aa12.68□□□□□ -0.38
CHMP2A-208ENST00000601220 PMS2P5A8MQ11 134 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 ZNF705GA8MUZ8 300 aaPredicted RBP12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 H3BRN7 92 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 M0R2Z0 102 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 HOXB5P09067 269 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 AP3S2P59780 193 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 SPINK13Q1W4C9 94 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 PYDC2Q56P42 97 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 ACOT7LQ6ZUV0 252 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 TMEM144Q7Z5S9 345 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 TMEM147Q9BVK8 224 aa12.67□□□□□ -0.38
CHMP2A-208ENST00000601220 H3BP45 60 aa12.66□□□□□ -0.38
CHMP2A-208ENST00000601220 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
CHMP2A-208ENST00000601220 AZU1P20160 251 aa12.66□□□□□ -0.38
CHMP2A-208ENST00000601220 DEDD2Q8WXF8 326 aa12.66□□□□□ -0.38
CHMP2A-208ENST00000601220 SHANK2-AS3Q9BTD1 123 aa12.66□□□□□ -0.38
CHMP2A-208ENST00000601220 SLC25A39Q9BZJ4 359 aaPredicted RBP12.66□□□□□ -0.38
CHMP2A-208ENST00000601220 LYRM9A8MSI8 78 aa12.65□□□□□ -0.38
CHMP2A-208ENST00000601220 TSPOP30536 169 aa12.65□□□□□ -0.38
CHMP2A-208ENST00000601220 PLP1P60201 277 aa12.65□□□□□ -0.38
CHMP2A-208ENST00000601220 CYP2G1PQ6ZSU1 146 aa12.65□□□□□ -0.38
CHMP2A-208ENST00000601220 ZNF575Q86XF7 245 aa12.65□□□□□ -0.38
CHMP2A-208ENST00000601220 BAP18Q8IXM2 172 aa12.65□□□□□ -0.38
CHMP2A-208ENST00000601220 TMEM208Q9BTX3 173 aa12.65□□□□□ -0.38
CHMP2A-208ENST00000601220 STRAPQ9Y3F4 350 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-208ENST00000601220 HSPG2P98160 4391 aa12.65□□□□□ -0.38
CHMP2A-208ENST00000601220 LRP1BQ9NZR2 4599 aa12.64□□□□□ -0.39
CHMP2A-208ENST00000601220 INSP01308 110 aa12.64□□□□□ -0.39
CHMP2A-208ENST00000601220 FAM3BP58499 235 aaPredicted RBP12.64□□□□□ -0.39
CHMP2A-208ENST00000601220 POLR2GP62487 172 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHMP2A-208ENST00000601220 AKR1C1Q04828 323 aa12.64□□□□□ -0.39
CHMP2A-208ENST00000601220 C1orf134Q5TEV5 83 aa12.64□□□□□ -0.39
CHMP2A-208ENST00000601220 CCDC190Q86UF4 302 aa12.64□□□□□ -0.39
CHMP2A-208ENST00000601220 C15orf53Q8NAA6 179 aa12.64□□□□□ -0.39
CHMP2A-208ENST00000601220 KRTAP4-5Q9BYR2 181 aa12.64□□□□□ -0.39
CHMP2A-208ENST00000601220 NACAE9PAV3 2078 aa12.63□□□□□ -0.39
CHMP2A-208ENST00000601220 TRAV12-2A0A075B6T6 113 aa12.63□□□□□ -0.39
CHMP2A-208ENST00000601220 ADAP1O75689 374 aa12.63□□□□□ -0.39
CHMP2A-208ENST00000601220 B2MP61769 119 aa12.63□□□□□ -0.39
CHMP2A-208ENST00000601220 FCN2Q15485 313 aa12.63□□□□□ -0.39
CHMP2A-208ENST00000601220 A0A087X0K7 114 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 C9orf170A2RU37 121 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 MRPS12O15235 138 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 CCNKO75909 580 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 IL5P05113 134 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 CXCL3P19876 107 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 S100A7P31151 101 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 UBE2MP61081 183 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 FGL1Q08830 312 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 SOHLH1Q5JUK2 328 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 PATE2Q6UY27 113 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 OR8A1Q8NGG7 326 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 HIGD1AQ9Y241 93 aa12.62□□□□□ -0.39
CHMP2A-208ENST00000601220 BOLA2-SMG1P6H3BVE0 249 aa12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 NOL3O60936 208 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 HYPMO75409 117 aa12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 DEFB130BP0DP73 79 aa12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 DEFB130AP0DP74 79 aa12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 RPL7P18124 248 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 ZNF738Q8NE65 137 aa12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 ZNRF2Q8NHG8 242 aa12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 SMIM8Q96KF7 97 aa12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 UHRF2Q96PU4 802 aa12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 PSENENQ9NZ42 101 aa12.61□□□□□ -0.39
CHMP2A-208ENST00000601220 K7EPK0 472 aa12.6□□□□□ -0.39
CHMP2A-208ENST00000601220 LINC00869P0C866 280 aa12.6□□□□□ -0.39
CHMP2A-208ENST00000601220 RAP2BP61225 183 aa12.6□□□□□ -0.39
CHMP2A-208ENST00000601220 PSG3Q16557 428 aa12.6□□□□□ -0.39
CHMP2A-208ENST00000601220 TMEM14EPQ6UXP3 125 aa12.6□□□□□ -0.39
CHMP2A-208ENST00000601220 SMCO3A2RU48 225 aa12.59□□□□□ -0.39
CHMP2A-208ENST00000601220 PRB4P10163 310 aaPredicted RBP12.59□□□□□ -0.39
CHMP2A-208ENST00000601220 TAS2R60P59551 318 aa12.59□□□□□ -0.39
CHMP2A-208ENST00000601220 SELENOTP62341 195 aa12.59□□□□□ -0.39
CHMP2A-208ENST00000601220 DLK1P80370 383 aa12.59□□□□□ -0.39
CHMP2A-208ENST00000601220 HIST1H1AQ02539 215 aaPredicted RBP12.59□□□□□ -0.39
CHMP2A-208ENST00000601220 LINC01587Q99440 93 aa12.59□□□□□ -0.39
CHMP2A-208ENST00000601220 FLVCR2Q9UPI3 526 aa12.59□□□□□ -0.39
CHMP2A-208ENST00000601220 NBDYA0A0U1RRE5 68 aa12.58□□□□□ -0.4
CHMP2A-208ENST00000601220 CBY3A6NI87 242 aa12.58□□□□□ -0.4
CHMP2A-208ENST00000601220 FNDC10F2Z333 226 aa12.58□□□□□ -0.4
CHMP2A-208ENST00000601220 F5H768 121 aa12.58□□□□□ -0.4
CHMP2A-208ENST00000601220 NDUFB6O95139 128 aa12.58□□□□□ -0.4
CHMP2A-208ENST00000601220 OR5G3P0C626 314 aa12.58□□□□□ -0.4
CHMP2A-208ENST00000601220 TNP2Q05952 138 aa12.58□□□□□ -0.4
CHMP2A-208ENST00000601220 MUC4Q99102 2169 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms