RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 OR10G4Q8NGN3 311 aa9.28□□□□□ -0.92
TGFB1-204ENST00000600196 OR10G9Q8NGN4 311 aa9.28□□□□□ -0.92
TGFB1-204ENST00000600196 OR10G7Q8NGN6 311 aa9.28□□□□□ -0.92
TGFB1-204ENST00000600196 ST8SIA2Q92186 375 aa9.28□□□□□ -0.92
TGFB1-204ENST00000600196 ACTR3CQ9C0K3 210 aaPredicted RBP9.28□□□□□ -0.92
TGFB1-204ENST00000600196 MLXQ9UH92 298 aa9.28□□□□□ -0.92
TGFB1-204ENST00000600196 NOTCH3Q9UM47 2321 aa9.28□□□□□ -0.92
TGFB1-204ENST00000600196 OR4C46A6NHA9 309 aa9.27□□□□□ -0.93
TGFB1-204ENST00000600196 KPRPQ5T749 579 aaPredicted RBP9.27□□□□□ -0.93
TGFB1-204ENST00000600196 SIGLEC15Q6ZMC9 328 aa9.27□□□□□ -0.93
TGFB1-204ENST00000600196 TCF24Q7RTU0 167 aa9.27□□□□□ -0.93
TGFB1-204ENST00000600196 LRRC20Q8TCA0 184 aa9.27□□□□□ -0.93
TGFB1-204ENST00000600196 VWFP04275 2813 aa9.27□□□□□ -0.93
TGFB1-204ENST00000600196 ZNF207O43670 478 aaKnown RBP9.26□□□□□ -0.93
TGFB1-204ENST00000600196 APOHP02749 345 aaPredicted RBP9.26□□□□□ -0.93
TGFB1-204ENST00000600196 HIST1H1EP10412 219 aaKnown RBP9.26□□□□□ -0.93
TGFB1-204ENST00000600196 IGLL1P15814 213 aa9.26□□□□□ -0.93
TGFB1-204ENST00000600196 PDE6HQ13956 83 aa9.26□□□□□ -0.93
TGFB1-204ENST00000600196 BEAN1Q3B7T3 259 aa9.26□□□□□ -0.93
TGFB1-204ENST00000600196 CD300EQ496F6 205 aaPredicted RBP9.26□□□□□ -0.93
TGFB1-204ENST00000600196 KHDC3LQ587J8 217 aa9.26□□□□□ -0.93
TGFB1-204ENST00000600196 RPP25LQ8N5L8 163 aaKnown RBP9.26□□□□□ -0.93
TGFB1-204ENST00000600196 HRH4Q9H3N8 390 aa9.26□□□□□ -0.93
TGFB1-204ENST00000600196 NRN1Q9NPD7 142 aa9.26□□□□□ -0.93
TGFB1-204ENST00000600196 RPRMQ9NS64 109 aa9.26□□□□□ -0.93
TGFB1-204ENST00000600196 DOK5Q9P104 306 aa9.26□□□□□ -0.93
TGFB1-204ENST00000600196 IGHV3OR16-8A0A075B7F1 116 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 CTXND1A0A1B0GTU2 59 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 MRPS12O15235 138 aaKnown RBP9.25□□□□□ -0.93
TGFB1-204ENST00000600196 STAG3L2P0CL84 134 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 STAG3L3P0CL85 134 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 CDC34P49427 236 aaPredicted RBP9.25□□□□□ -0.93
TGFB1-204ENST00000600196 SULT1A2P50226 295 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 TMEM61Q8N0U2 210 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 LYPD1Q8N2G4 141 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 ARL6IP6Q8N6S5 226 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 RNF141Q8WVD5 230 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 MBD3L1Q8WWY6 194 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 UHRF2Q96PU4 802 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 SH3BGRL3Q9H299 93 aa9.25□□□□□ -0.93
TGFB1-204ENST00000600196 TRAV1-1A0A0B4J248 108 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 ZNF785A8K8V0 405 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 TEX46H3BTG2 121 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 ISLRO14498 428 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 ID1P41134 155 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 PMS2P11Q13670 270 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 LCN15Q6UWW0 184 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 SUN5Q8TC36 379 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 RAB24Q969Q5 203 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 FAM167A-AS1Q96KT0 104 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 SLC50A1Q9BRV3 221 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 SCRT1Q9BWW7 348 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 OR51M1Q9H341 326 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 TMEM167BQ9NRX6 74 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 DNHD1Q96M86 4753 aa9.24□□□□□ -0.93
TGFB1-204ENST00000600196 SORL1Q92673 2214 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 K7EQG2 157 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 DNASE2O00115 360 aaPredicted RBP9.23□□□□□ -0.93
TGFB1-204ENST00000600196 CXorf1O96002 111 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 IGLC2P0DOY2 106 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 ATF4P18848 351 aaPredicted RBP9.23□□□□□ -0.93
TGFB1-204ENST00000600196 PSMB3P49720 205 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 PPT1P50897 306 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 RAB2AP61019 212 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 SNRPD3P62318 126 aaKnown RBP9.23□□□□□ -0.93
TGFB1-204ENST00000600196 RPL11P62913 178 aaKnown RBP9.23□□□□□ -0.93
TGFB1-204ENST00000600196 PSG9Q00887 426 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 GCSAMLQ5JQS6 135 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 TMED6Q8WW62 240 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 SAT2Q96F10 170 aaPredicted RBP9.23□□□□□ -0.93
TGFB1-204ENST00000600196 NKX6-2Q9C056 277 aaPredicted RBP9.23□□□□□ -0.93
TGFB1-204ENST00000600196 MS4A6AQ9H2W1 248 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 SLC25A22Q9H936 323 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 PRELID1Q9Y255 219 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 ZNF256Q9Y2P7 627 aaPredicted RBP9.23□□□□□ -0.93
TGFB1-204ENST00000600196 ARL2-SNX15V9GYD0 113 aa9.23□□□□□ -0.93
TGFB1-204ENST00000600196 IFNA7P01567 189 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 HBE1P02100 147 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 NBEAP1P0C6P0 100 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 GP9P14770 177 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 NKX2-5P52952 324 aaPredicted RBP9.22□□□□□ -0.93
TGFB1-204ENST00000600196 BLOC1S1P78537 153 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 OXLD1Q5BKU9 147 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 SPATA31B1PQ5VZV4 182 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 MIR17HGQ75NE6 70 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 MRPL53Q96EL3 112 aaKnown RBP9.22□□□□□ -0.93
TGFB1-204ENST00000600196 PAXXQ9BUH6 204 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 SLC25A2Q9BXI2 301 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 SMAD5-AS1Q9Y6J3 95 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 MGAM2Q2M2H8 2515 aa9.22□□□□□ -0.93
TGFB1-204ENST00000600196 TRBV19A0A075B6N1 114 aa9.21□□□□□ -0.94
TGFB1-204ENST00000600196 IGHV3OR16-13A0A075B7E8 117 aa9.21□□□□□ -0.94
TGFB1-204ENST00000600196 IGHV3-49A0A0A0MS15 119 aa9.21□□□□□ -0.94
TGFB1-204ENST00000600196 IGHV3-74A0A0B4J1X5 117 aa9.21□□□□□ -0.94
TGFB1-204ENST00000600196 BOLA2-SMG1P6H3BVE0 249 aa9.21□□□□□ -0.94
TGFB1-204ENST00000600196 SOCS3O14543 225 aa9.21□□□□□ -0.94
TGFB1-204ENST00000600196 MORN5Q5VZ52 161 aa9.21□□□□□ -0.94
TGFB1-204ENST00000600196 FAM122CQ6P4D5 195 aa9.21□□□□□ -0.94
TGFB1-204ENST00000600196 TEX261Q6UWH6 196 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms