RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 KLF5Q13887 457 aaPredicted RBP11.82□□□□□ -0.52
UPF1-206ENST00000598471 NSUN5P1Q3KNT7 163 aa11.82□□□□□ -0.52
UPF1-206ENST00000598471 C1orf194Q5T5A4 169 aa11.82□□□□□ -0.52
UPF1-206ENST00000598471 OR4F17Q8NGA8 305 aa11.82□□□□□ -0.52
UPF1-206ENST00000598471 RAX2Q96IS3 184 aa11.82□□□□□ -0.52
UPF1-206ENST00000598471 FAM167A-AS1Q96KT0 104 aa11.82□□□□□ -0.52
UPF1-206ENST00000598471 OR4F4Q96R69 305 aa11.82□□□□□ -0.52
UPF1-206ENST00000598471 OR51M1Q9H341 326 aa11.82□□□□□ -0.52
UPF1-206ENST00000598471 TMEM14CQ9P0S9 112 aa11.82□□□□□ -0.52
UPF1-206ENST00000598471 PEMTQ9UBM1 199 aa11.82□□□□□ -0.52
UPF1-206ENST00000598471 IGHV7-4-1A0A0J9YVY3 117 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 M0QZ24 198 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 SLURP1P55000 103 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 FHL3Q13643 280 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 LEMD1Q68G75 181 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 HIST2H2BDQ6DRA6 164 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 OR8I2Q8N0Y5 310 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 MARC2Q969Z3 335 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 ELOVL1Q9BW60 279 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 MANBALQ9NQG1 85 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 U3KQE9 123 aa11.81□□□□□ -0.52
UPF1-206ENST00000598471 BUB3O43684 328 aa11.8□□□□□ -0.52
UPF1-206ENST00000598471 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
UPF1-206ENST00000598471 MYCNOSP40205 109 aa11.8□□□□□ -0.52
UPF1-206ENST00000598471 GALR1P47211 349 aa11.8□□□□□ -0.52
UPF1-206ENST00000598471 TM4SF20Q53R12 229 aa11.8□□□□□ -0.52
UPF1-206ENST00000598471 DUX3Q96PT4 197 aa11.8□□□□□ -0.52
UPF1-206ENST00000598471 GNG13Q9P2W3 67 aa11.8□□□□□ -0.52
UPF1-206ENST00000598471 ADARB2-AS1A8MUL3 147 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 OR10J4P0C629 311 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 PYYP10082 97 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 GP9P14770 177 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 CCL20P78556 96 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 PMS2P11Q13670 270 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 COMMD7Q86VX2 200 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 CITED1Q99966 193 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 TMPRSS5Q9H3S3 457 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 SMPXQ9UHP9 88 aa11.79□□□□□ -0.52
UPF1-206ENST00000598471 IGHV3-49A0A0A0MS15 119 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 TMEM213A2RRL7 107 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 RAB19A4D1S5 217 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 HIST1H1EP10412 219 aaKnown RBP11.78□□□□□ -0.52
UPF1-206ENST00000598471 ATF4P18848 351 aaPredicted RBP11.78□□□□□ -0.52
UPF1-206ENST00000598471 C16orf54Q6UWD8 224 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 OR9G4Q8NGQ1 327 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 FXYD5Q96DB9 178 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 ZNF503Q96F45 646 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 FAM210AQ96ND0 272 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 RHPN1-AS1Q9BWJ2 59 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 ARL2-SNX15V9GYD0 113 aa11.78□□□□□ -0.52
UPF1-206ENST00000598471 IGHV3OR16-13A0A075B7E8 117 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 IGHV3-74A0A0B4J1X5 117 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 HELTA6NFD8 242 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 C2orf70A6NJV1 201 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 APOHP02749 345 aaPredicted RBP11.77□□□□□ -0.53
UPF1-206ENST00000598471 PF4P02776 101 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 BCL2P10415 239 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 MEOX2P50222 304 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 GUK1Q16774 197 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 HAGHQ16775 308 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 C12orf54Q6X4T0 127 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 SUN5Q8TC36 379 aa11.77□□□□□ -0.53
UPF1-206ENST00000598471 DLX4Q92988 240 aaPredicted RBP11.77□□□□□ -0.53
UPF1-206ENST00000598471 EIF5A2Q9GZV4 153 aaKnown RBP11.77□□□□□ -0.53
UPF1-206ENST00000598471 RBFOX3A6NFN3 312 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 OVOL1O14753 267 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 CHEK1O14757 476 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 CD5P06127 495 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 NBEAP1P0C6P0 100 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 PEA15Q15121 130 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 TOR2AQ5JU69 321 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 SIGLEC15Q6ZMC9 328 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 GLMPQ8WWB7 406 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 ZNF747Q9BV97 191 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 VAX2Q9UIW0 290 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 ATRQ13535 2644 aa11.76□□□□□ -0.53
UPF1-206ENST00000598471 LOC102723971A0A1B0GUV8 181 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 ZNF785A8K8V0 405 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 MRPS12O15235 138 aaKnown RBP11.75□□□□□ -0.53
UPF1-206ENST00000598471 PAGE4O60829 102 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 IGLC2P0DOY2 106 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 CBLN1P23435 193 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 UBE2G2P60604 165 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 PDE6HQ13956 83 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 ZNF506Q5JVG8 444 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 CST9LP1Q5W188 147 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 UQCC3Q6UW78 93 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 C3orf56Q8N813 242 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 BLNKQ8WV28 456 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 TXNDC17Q9BRA2 123 aa11.75□□□□□ -0.53
UPF1-206ENST00000598471 NKX6-2Q9C056 277 aaPredicted RBP11.75□□□□□ -0.53
UPF1-206ENST00000598471 A0A087X0K7 114 aa11.74□□□□□ -0.53
UPF1-206ENST00000598471 A0A1W2PRE2 83 aa11.74□□□□□ -0.53
UPF1-206ENST00000598471 FOLR2P14207 255 aa11.74□□□□□ -0.53
UPF1-206ENST00000598471 DYNLRB2Q8TF09 96 aa11.74□□□□□ -0.53
UPF1-206ENST00000598471 SMDT1Q9H4I9 107 aa11.74□□□□□ -0.53
UPF1-206ENST00000598471 ZNF586Q9NXT0 402 aa11.74□□□□□ -0.53
UPF1-206ENST00000598471 DNHD1Q96M86 4753 aa11.73□□□□□ -0.53
UPF1-206ENST00000598471 TRBV19A0A075B6N1 114 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms