RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 NPPCP23582 126 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 LEMD1Q68G75 181 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 KIR2DL5AQ8N109 375 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 KIR2DL5BQ8NHK3 375 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 IL17DQ8TAD2 202 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 RNF183Q96D59 192 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 LINC00052Q96N35 136 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 RABAC1Q9UI14 185 aa10.13□□□□□ -0.79
SCAF1-203ENST00000598359 UBE2CO00762 179 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 CST7O76096 145 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 NPY1RP25929 384 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 ATP6V0CP27449 155 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 BMI1P35226 326 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 DEFB131AP59861 70 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 PAFAH1B2P68402 229 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 HBG1P69891 147 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 HBG2P69892 147 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 CLINT1Q14677 625 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 Q6ZRG5 221 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 HSD17B11Q8NBQ5 300 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 STXBP6Q8NFX7 210 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 NPIPB3Q92617 1050 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 ACY3Q96HD9 319 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 METTL26Q96S19 204 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 TP53TG1Q9Y2A0 90 aa10.12□□□□□ -0.79
SCAF1-203ENST00000598359 ALMS1Q8TCU4 4167 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 PMS2P5A8MQ11 134 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 H3BP45 60 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 IFNA10P01566 189 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 CRYBB3P26998 211 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 OR10J1P30954 320 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 ARL16Q0P5N6 197 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 ATP6V1FQ16864 119 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 DPPA3Q6W0C5 159 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
SCAF1-203ENST00000598359 PSMG3Q9BT73 122 aaPredicted RBP10.11□□□□□ -0.79
SCAF1-203ENST00000598359 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 SH3BGRL3Q9H299 93 aa10.11□□□□□ -0.79
SCAF1-203ENST00000598359 TRAV30A0A087WSZ9 112 aa10.1□□□□□ -0.79
SCAF1-203ENST00000598359 CXorf65A6NEN9 183 aa10.1□□□□□ -0.79
SCAF1-203ENST00000598359 IFNA5P01569 189 aa10.1□□□□□ -0.79
SCAF1-203ENST00000598359 METTL15P1P0C7V9 234 aa10.1□□□□□ -0.79
SCAF1-203ENST00000598359 VWC2Q2TAL6 325 aa10.1□□□□□ -0.79
SCAF1-203ENST00000598359 TMEM217Q8N7C4 229 aa10.1□□□□□ -0.79
SCAF1-203ENST00000598359 TMEM231Q9H6L2 316 aa10.1□□□□□ -0.79
SCAF1-203ENST00000598359 FRAS1Q86XX4 4008 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 A0A1W2PS18 150 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 SCGB2A1O75556 95 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 CD5P06127 495 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 ZNF688P0C7X2 276 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 CMC4P56277 68 aaPredicted RBP10.09□□□□□ -0.79
SCAF1-203ENST00000598359 SLC38A11Q08AI6 406 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 USF2Q15853 346 aaPredicted RBP10.09□□□□□ -0.79
SCAF1-203ENST00000598359 SPANXN5Q5MJ07 72 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 C10orf91Q5T1B1 145 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 TMEM182Q6ZP80 229 aaPredicted RBP10.09□□□□□ -0.79
SCAF1-203ENST00000598359 OR2G3Q8NGZ4 309 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 Q8WTZ3 238 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 TIMM9Q9Y5J7 89 aa10.09□□□□□ -0.79
SCAF1-203ENST00000598359 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
SCAF1-203ENST00000598359 K7EQG2 157 aa10.08□□□□□ -0.8
SCAF1-203ENST00000598359 CA1P00915 261 aaPredicted RBP10.08□□□□□ -0.8
SCAF1-203ENST00000598359 IL4P05112 153 aa10.08□□□□□ -0.8
SCAF1-203ENST00000598359 CAMLGP49069 296 aa10.08□□□□□ -0.8
SCAF1-203ENST00000598359 YPEL3P61236 119 aaPredicted RBP10.08□□□□□ -0.8
SCAF1-203ENST00000598359 BPIFCQ8NFQ6 507 aa10.08□□□□□ -0.8
SCAF1-203ENST00000598359 NARS2Q96I59 477 aaKnown RBP10.08□□□□□ -0.8
SCAF1-203ENST00000598359 TMEM147Q9BVK8 224 aa10.08□□□□□ -0.8
SCAF1-203ENST00000598359 WDR61Q9GZS3 305 aaKnown RBP10.08□□□□□ -0.8
SCAF1-203ENST00000598359 HRH4Q9H3N8 390 aa10.08□□□□□ -0.8
SCAF1-203ENST00000598359 U3KQE9 123 aa10.08□□□□□ -0.8
SCAF1-203ENST00000598359 TRAV2A0A0B4J234 112 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 TMEM218A2RU14 115 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 IFNA4P05014 189 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 RD3LP0DJH9 198 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 PSG1P11464 419 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 SERF2P84101 59 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 ETFRF1Q6IPR1 90 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 C16orf54Q6UWD8 224 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 DCANP1Q8TF63 244 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 GLMPQ8WWB7 406 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 GRAMD2BQ96HH9 432 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 RARRES2Q99969 163 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 SCRT1Q9BWW7 348 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 CARHSP1Q9Y2V2 147 aaKnown RBP10.07□□□□□ -0.8
SCAF1-203ENST00000598359 HERC2O95714 4834 aa10.07□□□□□ -0.8
SCAF1-203ENST00000598359 RYR1P21817 5038 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 PRSS46E5RG02 174 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 DEFB4AO15263 64 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 TOMM40O96008 361 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 RPP30P78346 268 aaKnown RBP10.06□□□□□ -0.8
SCAF1-203ENST00000598359 GAMTQ14353 236 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 STHQ8IWL8 128 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 OR10P1Q8NGE3 313 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 OR51G1Q8NGK1 321 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 OR11H2Q8NH07 326 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 SCGB1C1Q8TD33 95 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 GGACTQ9BVM4 153 aa10.06□□□□□ -0.8
SCAF1-203ENST00000598359 IGKV1D-37A0A075B6S9 117 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms