RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 DEFB123Q8N688 67 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 MS4A6AQ9H2W1 248 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 SCRT2Q9NQ03 307 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 TP73-AS1Q9UF72 201 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 TRAV26-1A0A087WT03 109 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 K7ERU9 68 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 TAX1BP3O14907 124 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 ENSAO43768 121 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 ARF6P62330 175 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 SAMD13Q5VXD3 122 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 TMEM190Q8WZ59 177 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 CTSZQ9UBR2 303 aa11.83□□□□□ -0.52
SMARCA4-219ENST00000592604 NUDT3O95989 172 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 FTH1P19P0C7X4 201 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 IGHV1-8P0DP01 117 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 Q6ZS92 163 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 GATD1Q8NB37 220 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 KAAG1Q9UBP8 84 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 HSPB8Q9UJY1 196 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 F11RQ9Y624 299 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 TRAV8-1A0A0A6YYK1 113 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 CEACAM3P40198 252 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 C12orf54Q6X4T0 127 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 DEFB125Q8N687 156 aa11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 NEU4Q8WWR8 484 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-219ENST00000592604 IGHV3-21A0A0B4J1V1 117 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 IGHV3-72A0A0B4J1Y9 119 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 ZNF785A8K8V0 405 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 B9A039 149 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 RPS20P60866 119 aaKnown RBP11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 SLC25A39Q9BZJ4 359 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 SIGLEC9Q9Y336 463 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 IGLC1P0CG04 106 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 PSG1P11464 419 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 ZNF138P52744 262 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 VAMP3Q15836 100 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 LINC01545Q5VT33 79 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 CCL17Q92583 94 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 TMUB1Q9BVT8 246 aa11.81□□□□□ -0.52
SMARCA4-219ENST00000592604 TMEM133Q9H2Q1 129 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 A0A1B0GUT8 65 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 TEX22C9J3V5 150 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 CNTFRP26992 372 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 GOLT1AQ6ZVE7 132 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 PRNTQ86SH4 94 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 DEFB124Q8NES8 71 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 FAM57AQ8TBR7 257 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 SPAARA0A1B0GVQ0 90 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 LYZP61626 148 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 EXOC3-AS1Q8N2X6 119 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 SMPXQ9UHP9 88 aa11.8□□□□□ -0.52
SMARCA4-219ENST00000592604 APELAP0DMC3 54 aa11.79□□□□□ -0.52
SMARCA4-219ENST00000592604 HTR1DP28221 377 aa11.79□□□□□ -0.52
SMARCA4-219ENST00000592604 RBPJQ06330 500 aa11.79□□□□□ -0.52
SMARCA4-219ENST00000592604 ZFHX4Q86UP3 3567 aa11.79□□□□□ -0.52
SMARCA4-219ENST00000592604 MALRD1Q5VYJ5 2156 aa11.79□□□□□ -0.52
SMARCA4-219ENST00000592604 C16orf97H3BN30 126 aa11.79□□□□□ -0.52
SMARCA4-219ENST00000592604 RIGQ13278 110 aa11.79□□□□□ -0.52
SMARCA4-219ENST00000592604 A0A1B0GW15 77 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 I3L2K1 104 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 ABCA1O95477 2261 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 HIST1H1AQ02539 215 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 BSPH1Q075Z2 132 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 Q71RC1 249 aaPredicted RBP11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 PPP1R27Q86WC6 154 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 TMEM75Q8N9X5 138 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 MUC21A0A0G2JKD1 596 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 MUC21A0A140T8X8 626 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 CLEC3BP05452 202 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 MUC21Q5SSG8 566 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 ZC2HC1AQ96GY0 325 aa11.78□□□□□ -0.52
SMARCA4-219ENST00000592604 CD5LO43866 347 aa11.77□□□□□ -0.52
SMARCA4-219ENST00000592604 IGLV1-47P01700 117 aa11.77□□□□□ -0.52
SMARCA4-219ENST00000592604 ARMS2P0C7Q2 107 aa11.77□□□□□ -0.52
SMARCA4-219ENST00000592604 SRSF12Q8WXF0 261 aaKnown RBP11.77□□□□□ -0.52
SMARCA4-219ENST00000592604 ZNF747Q9BV97 191 aa11.77□□□□□ -0.52
SMARCA4-219ENST00000592604 AP5S1Q9NUS5 200 aa11.77□□□□□ -0.52
SMARCA4-219ENST00000592604 CUL9Q8IWT3 2517 aa11.77□□□□□ -0.53
SMARCA4-219ENST00000592604 ROS1P08922 2347 aa11.77□□□□□ -0.53
SMARCA4-219ENST00000592604 THBDP07204 575 aa11.77□□□□□ -0.53
SMARCA4-219ENST00000592604 MCRIP2Q9BUT9 160 aaKnown RBP11.77□□□□□ -0.53
SMARCA4-219ENST00000592604 NGBQ9NPG2 151 aa11.77□□□□□ -0.53
SMARCA4-219ENST00000592604 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 CSN3P07498 182 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 PRSS33Q8NF86 280 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 RASL11BQ9BPW5 248 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 SCNM1Q9BWG6 230 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 IGHV1-3A0A0C4DH29 117 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 IGKV1-17P01599 117 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 COX8AP10176 69 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 ERASQ7Z444 233 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 LYPD1Q8N2G4 141 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 RNASE6Q93091 150 aaKnown RBP11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 PMCHL2Q9BQD1 86 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 OR2T8A6NH00 312 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 RAB9AP51151 201 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 SHANK2-AS3Q9BTD1 123 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 HIF1ANQ9NWT6 349 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 INSIG2Q9Y5U4 225 aa11.76□□□□□ -0.53
SMARCA4-219ENST00000592604 CFAP47Q6ZTR5 3102 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms