RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 DIDO1Q9BTC0 2240 aaKnown RBP5□□□□□ -1.61
SMAD4-212ENST00000591126 WIPF3A6NGB9 483 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 IGHG4P01861 327 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 DMRTA1Q5VZB9 504 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 RNF183Q96D59 192 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 EPDR1Q9UM22 224 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 PSG8Q9UQ74 426 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 HEATR5BQ9P2D3 2071 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 PGPEP1LA6NFU8 196 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 DIRC3C9JPN6 131 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 CAMPP49913 170 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 NHLH2Q02577 135 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 RHOHQ15669 191 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 VAMP3Q15836 100 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 C8orf86Q6ZUL3 223 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 GSX1Q9H4S2 264 aaPredicted RBP5□□□□□ -1.61
SMAD4-212ENST00000591126 SPTBN2O15020 2390 aa5□□□□□ -1.61
SMAD4-212ENST00000591126 RNASE2P10153 161 aaKnown RBP4.99□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF79Q15937 498 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 Q1RN00 199 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 ORMDL2Q53FV1 153 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF841Q6ZN19 808 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 C15orf53Q8NAA6 179 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 NRGNQ92686 78 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 MRAP2Q96G30 205 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 RBM38Q9H0Z9 239 aaKnown RBP4.99□□□□□ -1.61
SMAD4-212ENST00000591126 TMEM14CQ9P0S9 112 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF580Q9UK33 172 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 SCN8AQ9UQD0 1980 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 OBSL1O75147 1896 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 SPRY2O43597 315 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 IGF1P05019 195 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 RPL35P42766 123 aaKnown RBP4.99□□□□□ -1.61
SMAD4-212ENST00000591126 DLX4Q92988 240 aaPredicted RBP4.99□□□□□ -1.61
SMAD4-212ENST00000591126 EDA2RQ9HAV5 297 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 FER1L5A0AVI2 2057 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 TMSB15BA0A087X1C1 80 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 A0A1B0GUT8 65 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 C7orf71A4D174 169 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 NDUFA3O95167 84 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 ODF1Q14990 250 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 VWC2Q2TAL6 325 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 SCN2AQ99250 2005 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 IGKV1D-13A0A0B4J2D9 117 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 KIR2DL5BA0A0G2JN68 375 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 KIR2DL5BA0A0G2JPC4 375 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 NUPR2A6NF83 97 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.99□□□□□ -1.61
SMAD4-212ENST00000591126 FCN3O75636 299 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 TNFRSF6BO95407 300 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 IGKV1-13P0DP09 117 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 CLLU1Q5K131 121 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 KIR2DL5AQ8N109 375 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 KIR2DL5BQ8NHK3 375 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF48Q96MX3 618 aaPredicted RBP4.99□□□□□ -1.61
SMAD4-212ENST00000591126 ADAMTS9Q9P2N4 1935 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 CEP250Q9BV73 2442 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 CUL9Q8IWT3 2517 aa4.99□□□□□ -1.61
SMAD4-212ENST00000591126 PCDH15Q96QU1 1955 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 TRBV20OR9-2A0A075B6H5 130 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 SRRM4A7MD48 611 aaKnown RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 COX6CP09669 75 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 NTF3P20783 257 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 LHFPL1Q86WI0 220 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 RTBDNQ9BSG5 229 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 PARP12Q9H0J9 701 aaKnown RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 NUP214P35658 2090 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 IGHV1OR15-1A0A075B7D0 117 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 A0A1W2PPI3 338 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 ODF3BA8MYP8 253 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 TSTD3H0UI37 97 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 SCGB1D1O95968 90 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 OR5A1Q8NGJ0 315 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 SPATA3Q8NHX4 192 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 RPP21Q9H633 154 aaKnown RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 LINC00574Q9H8X3 128 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 MUC22E2RYF6 1773 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 RBAKDNA6NC62 111 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 RBMY1BA6NDE4 496 aaKnown RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 RBMY1EA6NEQ0 496 aaKnown RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 INS-IGF2F8WCM5 200 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 M0R381 172 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 RBMY1DP0C7P1 496 aaKnown RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 RBMY1A1P0DJD3 496 aaKnown RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 RBMY1CP0DJD4 496 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 HBBP68871 147 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 TCF23Q7RTU1 214 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF491Q8N8L2 437 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 PAX4O43316 350 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 ZNF324O75467 553 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 TMEM183BQ1AE95 376 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 WDR86Q86TI4 376 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 C11orf53Q8IXP5 236 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 TMEM183AQ8IXX5 376 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 S4R3C0 116 aa4.98□□□□□ -1.61
SMAD4-212ENST00000591126 MKI67P46013 3256 aaKnown RBP4.98□□□□□ -1.61
SMAD4-212ENST00000591126 CNTFRP26992 372 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 SFTA2Q6UW10 78 aa4.97□□□□□ -1.61
SMAD4-212ENST00000591126 NXT2Q9NPJ8 142 aaKnown RBP4.97□□□□□ -1.61
SMAD4-212ENST00000591126 TRBV25-1A0A075B6N4 114 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 346 ms