RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 CIB3Q96Q77 187 aaPredicted RBP9.72□□□□□ -0.85
HDAC5-208ENST00000588419 ATG101Q9BSB4 218 aa9.72□□□□□ -0.85
HDAC5-208ENST00000588419 SYNGR2O43760 224 aa9.71□□□□□ -0.86
HDAC5-208ENST00000588419 DEFB130BP0DP73 79 aa9.71□□□□□ -0.86
HDAC5-208ENST00000588419 DEFB130AP0DP74 79 aa9.71□□□□□ -0.86
HDAC5-208ENST00000588419 TMEM128Q5BJH2 165 aa9.71□□□□□ -0.86
HDAC5-208ENST00000588419 TMEM182Q6ZP80 229 aaPredicted RBP9.71□□□□□ -0.86
HDAC5-208ENST00000588419 ACOT7LQ6ZUV0 252 aa9.71□□□□□ -0.86
HDAC5-208ENST00000588419 OR11H7Q8NGC8 314 aa9.71□□□□□ -0.86
HDAC5-208ENST00000588419 SLIRPQ9GZT3 109 aaKnown RBP9.71□□□□□ -0.86
HDAC5-208ENST00000588419 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 DUSP14O95147 198 aaKnown RBP9.7□□□□□ -0.86
HDAC5-208ENST00000588419 SFT2D2O95562 160 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 CFDP00746 253 aaPredicted RBP9.7□□□□□ -0.86
HDAC5-208ENST00000588419 HTN1P15515 57 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 TMBIM6P55061 237 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 AP3S2P59780 193 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 RHOBP62745 196 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 PPP1R1AQ13522 171 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 OXA1LQ15070 435 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 C1orf134Q5TEV5 83 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 Q6ZR54 194 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 SLC25A39Q9BZJ4 359 aaPredicted RBP9.7□□□□□ -0.86
HDAC5-208ENST00000588419 PPP1R14DQ9NXH3 145 aa9.7□□□□□ -0.86
HDAC5-208ENST00000588419 PKD1P98161 4303 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 DNAH11Q96DT5 4516 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 F5H768 121 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 H3BMQ9 156 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 NUDT3O95989 172 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 OR5G3P0C626 314 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 S100A7P31151 101 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 RAP2BP61225 183 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 HIST1H1AQ02539 215 aaPredicted RBP9.69□□□□□ -0.86
HDAC5-208ENST00000588419 RNF212Q495C1 297 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 C15orf53Q8NAA6 179 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 TRIM63Q969Q1 353 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 SLC45A2Q9UMX9 530 aa9.69□□□□□ -0.86
HDAC5-208ENST00000588419 STRAPQ9Y3F4 350 aaKnown RBP9.69□□□□□ -0.86
HDAC5-208ENST00000588419 TRAV8-2A0A0B4J237 113 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 PRSS46E5RG02 174 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 H3BRN7 92 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 IL5P05113 134 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 SLC25A6P12236 298 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 RRAS2P62070 204 aaPredicted RBP9.68□□□□□ -0.86
HDAC5-208ENST00000588419 FCN2Q15485 313 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 CYP2G1PQ6ZSU1 146 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 LRTM2Q8N967 370 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 LRRC20Q8TCA0 184 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 C17orf77Q96MU5 243 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 GPR82Q96P67 336 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 UHRF2Q96PU4 802 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 BCL7BQ9BQE9 202 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 HIGD1AQ9Y241 93 aa9.68□□□□□ -0.86
HDAC5-208ENST00000588419 CCDC160A6NGH7 325 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 A8MTW9 85 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 BOLA2-SMG1P6H3BVE0 249 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 CRXO43186 299 aaPredicted RBP9.67□□□□□ -0.86
HDAC5-208ENST00000588419 SSSCA1O60232 199 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 ADAP1O75689 374 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 SCGB1D2O95969 90 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 LINC00869P0C866 280 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 POLR2GP62487 172 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDAC5-208ENST00000588419 OR4D5Q8NGN0 318 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 LINC01587Q99440 93 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 SOSTQ9BQB4 213 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 PSENENQ9NZ42 101 aa9.67□□□□□ -0.86
HDAC5-208ENST00000588419 LYRM9A8MSI8 78 aa9.66□□□□□ -0.86
HDAC5-208ENST00000588419 CCNKO75909 580 aa9.66□□□□□ -0.86
HDAC5-208ENST00000588419 AZU1P20160 251 aa9.66□□□□□ -0.86
HDAC5-208ENST00000588419 SLC25A21Q9BQT8 299 aaPredicted RBP9.66□□□□□ -0.86
HDAC5-208ENST00000588419 V9GYH0 126 aa9.66□□□□□ -0.86
HDAC5-208ENST00000588419 HYPMO75409 117 aa9.65□□□□□ -0.86
HDAC5-208ENST00000588419 SNRPCP09234 159 aaKnown RBP9.65□□□□□ -0.86
HDAC5-208ENST00000588419 RPL7P18124 248 aaKnown RBP9.65□□□□□ -0.86
HDAC5-208ENST00000588419 S100A5P33763 92 aa9.65□□□□□ -0.86
HDAC5-208ENST00000588419 INPP1P49441 399 aa9.65□□□□□ -0.86
HDAC5-208ENST00000588419 TMEM144Q7Z5S9 345 aa9.65□□□□□ -0.86
HDAC5-208ENST00000588419 SHANK2-AS3Q9BTD1 123 aa9.65□□□□□ -0.86
HDAC5-208ENST00000588419 C16orf90A8MZG2 172 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 ATP5G1P05496 136 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 METTL15P1P0C7V9 234 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 ANXA7P20073 488 aaKnown RBP9.64□□□□□ -0.87
HDAC5-208ENST00000588419 ATP5G3P48201 142 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 B2MP61769 119 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 TNP2Q05952 138 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 SLC38A11Q08AI6 406 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 CLINT1Q14677 625 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 OR8A1Q8NGG7 326 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 ARL6Q9H0F7 186 aa9.64□□□□□ -0.87
HDAC5-208ENST00000588419 LINC00854A0A1B0GVQ3 168 aa9.63□□□□□ -0.87
HDAC5-208ENST00000588419 CXCL3P19876 107 aa9.63□□□□□ -0.87
HDAC5-208ENST00000588419 C16orf74Q96GX8 76 aa9.63□□□□□ -0.87
HDAC5-208ENST00000588419 MGAT4CQ9UBM8 478 aa9.63□□□□□ -0.87
HDAC5-208ENST00000588419 NBDYA0A0U1RRE5 68 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 PLAC8L1A1L4L8 177 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 C9orf170A2RU37 121 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 J3KRW8 73 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 CCL18P55774 89 aa9.62□□□□□ -0.87
HDAC5-208ENST00000588419 FAM3BP58499 235 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms