RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 CD81P60033 236 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 RELQ04864 619 aaPredicted RBP9.7□□□□□ -0.86
SRSF1-204ENST00000581979 SOHLH1Q5JUK2 328 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 LCNL1Q6ZST4 164 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 Q8N2B8 174 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 CYB561D1Q8N8Q1 229 aa9.7□□□□□ -0.86
SRSF1-204ENST00000581979 CARHSP1Q9Y2V2 147 aaKnown RBP9.7□□□□□ -0.86
SRSF1-204ENST00000581979 H3BRN7 92 aa9.69□□□□□ -0.86
SRSF1-204ENST00000581979 BMPR1BO00238 502 aa9.69□□□□□ -0.86
SRSF1-204ENST00000581979 PSMB8P28062 276 aa9.69□□□□□ -0.86
SRSF1-204ENST00000581979 ATP5G3P48201 142 aa9.69□□□□□ -0.86
SRSF1-204ENST00000581979 LEMD1Q68G75 181 aa9.69□□□□□ -0.86
SRSF1-204ENST00000581979 TEX38Q6PEX7 206 aa9.69□□□□□ -0.86
SRSF1-204ENST00000581979 C10orf99Q6UWK7 81 aa9.69□□□□□ -0.86
SRSF1-204ENST00000581979 SHANK2-AS3Q9BTD1 123 aa9.69□□□□□ -0.86
SRSF1-204ENST00000581979 RABAC1Q9UI14 185 aa9.69□□□□□ -0.86
SRSF1-204ENST00000581979 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.68□□□□□ -0.86
SRSF1-204ENST00000581979 FAM74A7A6NL05 159 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 S100A7P31151 101 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 TOMM20LQ6UXN7 152 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 CCDC28AQ8IWP9 274 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 SVBPQ8N300 66 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 OR4X2Q8NGF9 303 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 SUN5Q8TC36 379 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 TXNDC17Q9BRA2 123 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 YTHDF2Q9Y5A9 579 aaKnown RBP9.68□□□□□ -0.86
SRSF1-204ENST00000581979 ARL2-SNX15V9GYD0 113 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 PDE6DO43924 150 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 ELANEP08246 267 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 FOXE3Q13461 319 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 GUCA2BQ16661 112 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 KLHDC1Q8N7A1 406 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 FXYD5Q96DB9 178 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 ZFAND3Q9H8U3 227 aa9.68□□□□□ -0.86
SRSF1-204ENST00000581979 IGHV3OR16-8A0A075B7F1 116 aa9.67□□□□□ -0.86
SRSF1-204ENST00000581979 ZNF98A6NK75 572 aa9.67□□□□□ -0.86
SRSF1-204ENST00000581979 F6UZH7 168 aa9.67□□□□□ -0.86
SRSF1-204ENST00000581979 TMEM250H0YL14 139 aa9.67□□□□□ -0.86
SRSF1-204ENST00000581979 NDUFS6O75380 124 aaKnown RBP9.67□□□□□ -0.86
SRSF1-204ENST00000581979 TRBV12-3P01733 135 aa9.67□□□□□ -0.86
SRSF1-204ENST00000581979 ZNF343Q6P1L6 599 aa9.67□□□□□ -0.86
SRSF1-204ENST00000581979 SERTAD4Q9NUC0 356 aa9.67□□□□□ -0.86
SRSF1-204ENST00000581979 A0A1W2PRE2 83 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 RPLP1P05386 114 aaKnown RBP9.66□□□□□ -0.86
SRSF1-204ENST00000581979 SNRPCP09234 159 aaKnown RBP9.66□□□□□ -0.86
SRSF1-204ENST00000581979 GP9P14770 177 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 FAM90A2PQ658T7 463 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 BPIFA4PQ86YQ2 179 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 BLNKQ8WV28 456 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 ZNF414Q96IQ9 312 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 OR5B12Q96R08 314 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 TMEM14CQ9P0S9 112 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 RNF24Q9Y225 148 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 TGP01266 2768 aa9.66□□□□□ -0.86
SRSF1-204ENST00000581979 SNAPINO95295 136 aa9.65□□□□□ -0.86
SRSF1-204ENST00000581979 NBEAP1P0C6P0 100 aa9.65□□□□□ -0.86
SRSF1-204ENST00000581979 ZNF674Q2M3X9 581 aa9.65□□□□□ -0.86
SRSF1-204ENST00000581979 FAM209BQ5JX69 171 aa9.65□□□□□ -0.86
SRSF1-204ENST00000581979 OR4F17Q8NGA8 305 aa9.65□□□□□ -0.86
SRSF1-204ENST00000581979 WIPF2Q8TF74 440 aaPredicted RBP9.65□□□□□ -0.86
SRSF1-204ENST00000581979 RPUSD4Q96CM3 377 aaKnown RBP9.65□□□□□ -0.86
SRSF1-204ENST00000581979 C20orf24Q9BUV8 137 aa9.65□□□□□ -0.86
SRSF1-204ENST00000581979 PEF1Q9UBV8 284 aaKnown RBP9.65□□□□□ -0.86
SRSF1-204ENST00000581979 ZNF727A8MUV8 499 aa9.65□□□□□ -0.87
SRSF1-204ENST00000581979 SCO1O75880 301 aa9.65□□□□□ -0.87
SRSF1-204ENST00000581979 METTL26Q96S19 204 aa9.65□□□□□ -0.87
SRSF1-204ENST00000581979 NIPSNAP3BQ9BS92 247 aa9.65□□□□□ -0.87
SRSF1-204ENST00000581979 PARLQ9H300 379 aa9.65□□□□□ -0.87
SRSF1-204ENST00000581979 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
SRSF1-204ENST00000581979 M0R036 132 aa9.64□□□□□ -0.87
SRSF1-204ENST00000581979 NDUFA4O00483 81 aa9.64□□□□□ -0.87
SRSF1-204ENST00000581979 GGCTO75223 188 aaKnown RBP9.64□□□□□ -0.87
SRSF1-204ENST00000581979 HIST1H1EP10412 219 aaKnown RBP9.64□□□□□ -0.87
SRSF1-204ENST00000581979 SUMO1P63165 101 aaKnown RBP9.64□□□□□ -0.87
SRSF1-204ENST00000581979 ATRAIDQ6UW56 229 aa9.64□□□□□ -0.87
SRSF1-204ENST00000581979 C11orf44Q8N8P7 122 aa9.64□□□□□ -0.87
SRSF1-204ENST00000581979 CLRN3Q8NCR9 226 aa9.64□□□□□ -0.87
SRSF1-204ENST00000581979 NKX6-2Q9C056 277 aaPredicted RBP9.64□□□□□ -0.87
SRSF1-204ENST00000581979 GGTLC3B5MD39 225 aa9.63□□□□□ -0.87
SRSF1-204ENST00000581979 H3BQ15 152 aa9.63□□□□□ -0.87
SRSF1-204ENST00000581979 H3BTX0 84 aa9.63□□□□□ -0.87
SRSF1-204ENST00000581979 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
SRSF1-204ENST00000581979 NPPCP23582 126 aa9.63□□□□□ -0.87
SRSF1-204ENST00000581979 RANP62826 216 aaKnown RBP9.63□□□□□ -0.87
SRSF1-204ENST00000581979 FAM74A3Q4VXF1 159 aa9.63□□□□□ -0.87
SRSF1-204ENST00000581979 OR8I2Q8N0Y5 310 aa9.63□□□□□ -0.87
SRSF1-204ENST00000581979 SMIM7Q9BQ49 75 aa9.63□□□□□ -0.87
SRSF1-204ENST00000581979 ZNF586Q9NXT0 402 aa9.63□□□□□ -0.87
SRSF1-204ENST00000581979 PRKDCP78527 4128 aaKnown RBP9.63□□□□□ -0.87
SRSF1-204ENST00000581979 NDUFB4O95168 129 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 RPL7P18124 248 aaKnown RBP9.62□□□□□ -0.87
SRSF1-204ENST00000581979 HIST2H2BDQ6DRA6 164 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 RNF152Q8N8N0 203 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 MYOZ3Q8TDC0 251 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 TVP23CQ96ET8 276 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 UBE2E2Q96LR5 201 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 PGPA6NDG6 321 aa9.62□□□□□ -0.87
SRSF1-204ENST00000581979 MRPS12O15235 138 aaKnown RBP9.62□□□□□ -0.87
SRSF1-204ENST00000581979 LGALS1P09382 135 aaKnown RBP9.62□□□□□ -0.87
SRSF1-204ENST00000581979 IGLC2P0DOY2 106 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms