RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SLC25A22Q9H936 323 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 IGHV3-35A0A0C4DH35 117 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 A0A1B0GV50 99 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 A0A1W2PPV4 95 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 COX7A2P2O60397 106 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 TRBV12-3P01733 135 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 ORM2P19652 201 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 ARL3P36405 182 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 DEFA6Q01524 100 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 ZNF726P1Q15940 193 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 OR1B1Q8NGR6 318 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 WIPF2Q8TF74 440 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 DNAJC4Q9NNZ3 241 aa10.7□□□□□ -0.7
CDK5RAP3-219ENST00000580670 NIPBLQ6KC79 2804 aaeCLIP10.7□□□□□ -0.73e-6■■■■□ 20.4
CDK5RAP3-219ENST00000580670 TGIF2-C20orf24A0A0A6YYL0 155 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 HAX1O00165 279 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PHOX2AO14813 284 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PPP1R2P9O14990 202 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 IL4P05112 153 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 OR5G3P0C626 314 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 CDC34P49427 236 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PMS2P11Q13670 270 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 SSX7Q7RTT5 188 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 OR1L4Q8NGR5 311 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 MBD3L1Q8WWY6 194 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 TMEM37Q8WXS4 190 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 UBE2E2Q96LR5 201 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 RNF114Q9Y508 228 aa10.69□□□□□ -0.7
CDK5RAP3-219ENST00000580670 CTXND1A0A1B0GTU2 59 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 CLPSL1A2RUU4 121 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 HYPMO75409 117 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PLP1P60201 277 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 RHOBP62745 196 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 RELQ04864 619 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 TCTEX1D4Q5JR98 221 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 FAM78BQ5VT40 261 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 C10orf113Q5VZT2 155 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 FAM90A2PQ658T7 463 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 LCN15Q6UWW0 184 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PATE2Q6UY27 113 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 GATAD1Q8WUU5 269 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 RAB24Q969Q5 203 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 C19orf24Q9BVV8 132 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 SEPSECSQ9HD40 501 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 C2CD3Q4AC94 2353 aa10.68□□□□□ -0.7
CDK5RAP3-219ENST00000580670 TRBV24-1A0A075B6N3 115 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 WI2-2373I1.2A0A1W2PRP0 233 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 TRGC2P03986 189 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 KHDC1LQ5JSQ8 128 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 SPATA31B1PQ5VZV4 182 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 RNF125Q96EQ8 232 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 FAM210BQ96KR6 192 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 CTDSP1Q9GZU7 261 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 SETD2Q9BYW2 2564 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 MAP1LC3B2A6NCE7 125 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 LGALS1P09382 135 aaKnown RBP10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 TRGC1P0CF51 173 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 FGF8P55075 233 aaPredicted RBP10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PKIAP61925 76 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 MIR17HGQ75NE6 70 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 C14orf144Q96I85 54 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 ZNF414Q96IQ9 312 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 UHRF2Q96PU4 802 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 RNF2Q99496 336 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 MAP1LC3BQ9GZQ8 125 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 FUT9Q9Y231 359 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 HIGD1AQ9Y241 93 aa10.67□□□□□ -0.7
CDK5RAP3-219ENST00000580670 JMJD1CQ15652 2540 aa10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 BMPR1BO00238 502 aa10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 NDUFS6O75380 124 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 CDPF1Q6NVV7 123 aa10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 TOMM20LQ6UXN7 152 aa10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 LINC00305Q7Z4B0 112 aa10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 REC114Q7Z4M0 266 aa10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 FRZBQ92765 325 aa10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 MRPL32Q9BYC8 188 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 GPR61Q9BZJ8 451 aa10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 SDF2L1Q9HCN8 221 aa10.66□□□□□ -0.7
CDK5RAP3-219ENST00000580670 IGHV3OR16-8A0A075B7F1 116 aa10.65□□□□□ -0.7
CDK5RAP3-219ENST00000580670 GGCTO75223 188 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-219ENST00000580670 CD28P10747 220 aa10.65□□□□□ -0.7
CDK5RAP3-219ENST00000580670 PROK1P58294 105 aa10.65□□□□□ -0.7
CDK5RAP3-219ENST00000580670 USF2Q15853 346 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-219ENST00000580670 C11orf44Q8N8P7 122 aa10.65□□□□□ -0.7
CDK5RAP3-219ENST00000580670 ZFAND3Q9H8U3 227 aa10.65□□□□□ -0.7
CDK5RAP3-219ENST00000580670 MRPL27Q9P0M9 148 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-219ENST00000580670 BCL2P10415 239 aa10.65□□□□□ -0.71
CDK5RAP3-219ENST00000580670 MORN5Q5VZ52 161 aa10.65□□□□□ -0.71
CDK5RAP3-219ENST00000580670 HIST2H2BDQ6DRA6 164 aa10.65□□□□□ -0.71
CDK5RAP3-219ENST00000580670 C18orf65Q6ZTR6 163 aa10.65□□□□□ -0.71
CDK5RAP3-219ENST00000580670 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.65□□□□□ -0.71
CDK5RAP3-219ENST00000580670 PYGO2Q9BRQ0 406 aa10.65□□□□□ -0.71
CDK5RAP3-219ENST00000580670 URGCP-MRPS24S4R325 110 aa10.65□□□□□ -0.71
CDK5RAP3-219ENST00000580670 TRAV5A0A0B4J249 113 aa10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 NDUFA4O00483 81 aa10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 STAG3L2P0CL84 134 aa10.64□□□□□ -0.71
CDK5RAP3-219ENST00000580670 STAG3L3P0CL85 134 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms