RNA–Protein interactions for RNA: ENST00000578681.5

DDX42-208, Transcript of DEAD-box helicase 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX42, Length 4,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-208ENST00000578681 SRSF8Q9BRL6 282 aaKnown RBP13.37□□□□□ -0.27
DDX42-208ENST00000578681 A1L4Q6 167 aa13.37□□□□□ -0.27
DDX42-208ENST00000578681 NPPCP23582 126 aa13.37□□□□□ -0.27
DDX42-208ENST00000578681 PTPRBP23467 1997 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 SRP14P37108 136 aaKnown RBP13.36□□□□□ -0.27
DDX42-208ENST00000578681 TCRBV4S1A1TA0A5B7 111 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 MPV17L2Q567V2 206 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 FAM19A2Q8N3H0 131 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 LINC00527Q9UJ94 153 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 TBL2Q9Y4P3 447 aaKnown RBP13.36□□□□□ -0.27
DDX42-208ENST00000578681 PPBPP02775 128 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 LY6EQ16553 131 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 CR1LQ2VPA4 569 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 C12orf54Q6X4T0 127 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 NEU4Q8WWR8 484 aaPredicted RBP13.36□□□□□ -0.27
DDX42-208ENST00000578681 C20orf144Q9BQM9 153 aa13.36□□□□□ -0.27
DDX42-208ENST00000578681 GEMIN7Q9H840 131 aaKnown RBP13.36□□□□□ -0.27
DDX42-208ENST00000578681 CCDC144NLQ6NUI1 221 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 ASCL2Q99929 193 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 MYO9AB2RTY4 2548 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 SETD2Q9BYW2 2564 aaPredicted RBP13.35□□□□□ -0.27
DDX42-208ENST00000578681 ZNF785A8K8V0 405 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 M0R2Z0 102 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 ESDP10768 282 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 ZNF841Q6ZN19 808 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 NAV2Q8IVL1 2488 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 IGKV1OR2-108A0A075B7D4 117 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 CSN1S1P47710 185 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 EPG5Q9HCE0 2579 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 NBR2O15453 112 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 FCER1GP30273 86 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 TEX45Q8NA69 505 aa13.35□□□□□ -0.27
DDX42-208ENST00000578681 SONP18583 2426 aaKnown RBP13.35□□□□□ -0.27
DDX42-208ENST00000578681 ZFHX4Q86UP3 3567 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 H3BUT2 72 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 K7EP13 123 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 CT45A10P0DMU9 189 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 COL8A1P27658 744 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 ZC2HC1AQ96GY0 325 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 MRPL18Q9H0U6 180 aaKnown RBP13.34□□□□□ -0.27
DDX42-208ENST00000578681 TRBV24-1A0A075B6N3 115 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 IGHV3-66A0A0C4DH42 116 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 GOLT1AQ6ZVE7 132 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 ATP5J2P56134 94 aa13.34□□□□□ -0.27
DDX42-208ENST00000578681 CENPVQ7Z7K6 275 aaPredicted RBP13.34□□□□□ -0.27
DDX42-208ENST00000578681 MORN5Q5VZ52 161 aa13.33□□□□□ -0.27
DDX42-208ENST00000578681 VMO1Q7Z5L0 202 aa13.33□□□□□ -0.27
DDX42-208ENST00000578681 BPESC1Q9GZL8 116 aa13.33□□□□□ -0.27
DDX42-208ENST00000578681 CHEK1O14757 476 aa13.33□□□□□ -0.28
DDX42-208ENST00000578681 ATP5IP56385 69 aaPredicted RBP13.33□□□□□ -0.28
DDX42-208ENST00000578681 OR4A5Q8NH83 315 aa13.33□□□□□ -0.28
DDX42-208ENST00000578681 AAMDCQ9H7C9 122 aa13.33□□□□□ -0.28
DDX42-208ENST00000578681 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
DDX42-208ENST00000578681 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.33□□□□□ -0.28
DDX42-208ENST00000578681 VWC2Q2TAL6 325 aa13.33□□□□□ -0.28
DDX42-208ENST00000578681 FER1L6-AS1Q8NA97 138 aa13.33□□□□□ -0.28
DDX42-208ENST00000578681 MRPL32Q9BYC8 188 aaKnown RBP13.33□□□□□ -0.28
DDX42-208ENST00000578681 PF4V1P10720 104 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 KIR2DL5BA0A0G2JN68 375 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 KIR2DL5BA0A0G2JPC4 375 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 TSPOP30536 169 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 MRPL52Q86TS9 123 aaKnown RBP13.32□□□□□ -0.28
DDX42-208ENST00000578681 KIR2DL5AQ8N109 375 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 C19orf24Q9BVV8 132 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 C1RLQ9NZP8 487 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 LSM4Q9Y4Z0 139 aaKnown RBP13.32□□□□□ -0.28
DDX42-208ENST00000578681 IGHV2-70DA0A0C4DH43 119 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 P01737 135 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 FAM106CPP0CH98 169 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 PEX7O00628 323 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 AMY1AP04745 511 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 MTURNQ8N3F0 131 aa13.32□□□□□ -0.28
DDX42-208ENST00000578681 MRPL36Q9P0J6 103 aaKnown RBP13.32□□□□□ -0.28
DDX42-208ENST00000578681 CGB1A6NKQ9 187 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 CSN3P07498 182 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 POU2AF1Q16633 256 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 KAAG1Q9UBP8 84 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 HERV-K104P63124 156 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 LCN12Q6JVE5 192 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 SLC25A34Q6PIV7 304 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 J3KRW8 73 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 PFN1P07737 140 aaKnown RBP13.31□□□□□ -0.28
DDX42-208ENST00000578681 TMEM219Q86XT9 240 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 SMIM20Q8N5G0 67 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 TMEM242Q9NWH2 141 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 JKAMPQ9P055 326 aa13.31□□□□□ -0.28
DDX42-208ENST00000578681 COL27A1Q8IZC6 1860 aaPredicted RBP13.31□□□□□ -0.28
DDX42-208ENST00000578681 TRAV8-1A0A0A6YYK1 113 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 BPIFA4PQ86YQ2 179 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 EXOC3-AS1Q8N2X6 119 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 ARPC1AQ92747 370 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 GGTLC3B5MD39 225 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 PRR20EP86478 221 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 PRR20CP86479 221 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 PRR20DP86480 221 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 PRR20BP86481 221 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 PRR20AP86496 221 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 IL36BQ9NZH7 164 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 BRD3OSQ6XYD6 125 aa13.3□□□□□ -0.28
DDX42-208ENST00000578681 ZZEF1O43149 2961 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms