RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 PIK3C2AO00443 1686 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 C2orf70A6NJV1 201 aa3.54□□□□□ -1.84
CALCOCO2-226ENST00000575461 LYZL6O75951 148 aa3.54□□□□□ -1.84
CALCOCO2-226ENST00000575461 OR10J4P0C629 311 aa3.54□□□□□ -1.84
CALCOCO2-226ENST00000575461 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
CALCOCO2-226ENST00000575461 SFT2D1Q8WV19 159 aa3.54□□□□□ -1.84
CALCOCO2-226ENST00000575461 SPANXCQ9NY87 97 aa3.54□□□□□ -1.84
CALCOCO2-226ENST00000575461 EML6Q6ZMW3 1958 aa3.54□□□□□ -1.84
CALCOCO2-226ENST00000575461 VWDEQ8N2E2 1590 aa3.54□□□□□ -1.84
CALCOCO2-226ENST00000575461 TRPM1Q7Z4N2 1603 aa3.53□□□□□ -1.84
CALCOCO2-226ENST00000575461 C17orf112F2Z3M2 114 aa3.53□□□□□ -1.84
CALCOCO2-226ENST00000575461 K7ERJ3 54 aa3.53□□□□□ -1.84
CALCOCO2-226ENST00000575461 RER1O15258 196 aa3.53□□□□□ -1.84
CALCOCO2-226ENST00000575461 DHFRP00374 187 aa3.53□□□□□ -1.84
CALCOCO2-226ENST00000575461 BRS3P32247 399 aa3.53□□□□□ -1.84
CALCOCO2-226ENST00000575461 OR2T35Q8NGX2 323 aa3.53□□□□□ -1.84
CALCOCO2-226ENST00000575461 RETNLBQ9BQ08 111 aa3.53□□□□□ -1.84
CALCOCO2-226ENST00000575461 SCN8AQ9UQD0 1980 aa3.52□□□□□ -1.85
CALCOCO2-226ENST00000575461 TRGV2A0A075B6R0 118 aa3.52□□□□□ -1.85
CALCOCO2-226ENST00000575461 KPNA4O00629 521 aaPredicted RBP3.52□□□□□ -1.85
CALCOCO2-226ENST00000575461 OVOL1O14753 267 aa3.52□□□□□ -1.85
CALCOCO2-226ENST00000575461 NDUFA6P56556 154 aa3.52□□□□□ -1.85
CALCOCO2-226ENST00000575461 KLRD1Q13241 179 aa3.52□□□□□ -1.85
CALCOCO2-226ENST00000575461 PCOTHQ58A44 107 aa3.52□□□□□ -1.85
CALCOCO2-226ENST00000575461 HRCT1Q6UXD1 115 aa3.52□□□□□ -1.85
CALCOCO2-226ENST00000575461 TRBV6-5A0A0K0K1A5 114 aa3.51□□□□□ -1.85
CALCOCO2-226ENST00000575461 RPS3P23396 243 aaKnown RBP eCLIP3.51□□□□□ -1.85
CALCOCO2-226ENST00000575461 SDC2P34741 201 aa3.51□□□□□ -1.85
CALCOCO2-226ENST00000575461 ROMO1P60602 79 aa3.51□□□□□ -1.85
CALCOCO2-226ENST00000575461 TMEM254Q8TBM7 123 aa3.51□□□□□ -1.85
CALCOCO2-226ENST00000575461 GBF1Q92538 1859 aa3.5□□□□□ -1.85
CALCOCO2-226ENST00000575461 J3KT08 172 aa3.5□□□□□ -1.85
CALCOCO2-226ENST00000575461 FABP2P12104 132 aa3.5□□□□□ -1.85
CALCOCO2-226ENST00000575461 DEFB113Q30KQ7 82 aa3.5□□□□□ -1.85
CALCOCO2-226ENST00000575461 C10orf55Q5SWW7 151 aa3.5□□□□□ -1.85
CALCOCO2-226ENST00000575461 CHCHD1Q96BP2 118 aaKnown RBP3.5□□□□□ -1.85
CALCOCO2-226ENST00000575461 LXNQ9BS40 222 aa3.5□□□□□ -1.85
CALCOCO2-226ENST00000575461 TRAPPC2LQ9UL33 140 aa3.5□□□□□ -1.85
CALCOCO2-226ENST00000575461 SOX21Q9Y651 276 aaPredicted RBP3.5□□□□□ -1.85
CALCOCO2-226ENST00000575461 FN1P02751 2386 aaKnown RBP3.49□□□□□ -1.85
CALCOCO2-226ENST00000575461 ARAP1Q96P48 1450 aa3.49□□□□□ -1.85
CALCOCO2-226ENST00000575461 IGHV1-58A0A0C4DH39 117 aa3.49□□□□□ -1.85
CALCOCO2-226ENST00000575461 RAB5CP51148 216 aa3.49□□□□□ -1.85
CALCOCO2-226ENST00000575461 MCEEQ96PE7 176 aa3.49□□□□□ -1.85
CALCOCO2-226ENST00000575461 RASL12Q9NYN1 266 aa3.49□□□□□ -1.85
CALCOCO2-226ENST00000575461 BAHCC1Q9P281 2608 aa3.49□□□□□ -1.85
CALCOCO2-226ENST00000575461 RTL9Q8NET4 1388 aa3.49□□□□□ -1.85
CALCOCO2-226ENST00000575461 NISCHQ9Y2I1 1504 aa3.49□□□□□ -1.85
CALCOCO2-226ENST00000575461 ANAPC1Q9H1A4 1944 aa3.48□□□□□ -1.85
CALCOCO2-226ENST00000575461 RGS12O14924 1447 aa3.48□□□□□ -1.85
CALCOCO2-226ENST00000575461 ARHGEF11O15085 1522 aa3.48□□□□□ -1.85
CALCOCO2-226ENST00000575461 A0A1B0GX51 115 aa3.47□□□□□ -1.85
CALCOCO2-226ENST00000575461 GTF2A1P52655 376 aaPredicted RBP3.47□□□□□ -1.85
CALCOCO2-226ENST00000575461 TMEM229BQ8NBD8 167 aa3.47□□□□□ -1.85
CALCOCO2-226ENST00000575461 POP5Q969H6 163 aaKnown RBP3.47□□□□□ -1.85
CALCOCO2-226ENST00000575461 ZNF625Q96I27 306 aaPredicted RBP3.47□□□□□ -1.85
CALCOCO2-226ENST00000575461 N4BP2Q86UW6 1770 aaPredicted RBP3.47□□□□□ -1.85
CALCOCO2-226ENST00000575461 RTTNQ86VV8 2226 aa3.46□□□□□ -1.86
CALCOCO2-226ENST00000575461 DEGS1O15121 323 aa3.46□□□□□ -1.86
CALCOCO2-226ENST00000575461 DSCR4P56555 118 aaPredicted RBP3.46□□□□□ -1.86
CALCOCO2-226ENST00000575461 PSG9Q00887 426 aa3.46□□□□□ -1.86
CALCOCO2-226ENST00000575461 C4orf22Q6V702 233 aa3.46□□□□□ -1.86
CALCOCO2-226ENST00000575461 OR5D14Q8NGL3 314 aa3.46□□□□□ -1.86
CALCOCO2-226ENST00000575461 JPT1Q9UK76 154 aa3.46□□□□□ -1.86
CALCOCO2-226ENST00000575461 COL4A5P29400 1685 aa3.46□□□□□ -1.86
CALCOCO2-226ENST00000575461 NUP210Q8TEM1 1887 aaPredicted RBP3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 COL5A3P25940 1745 aaPredicted RBP3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 A0A087WX48 190 aa3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 TRBV7-6A0A0J9YX20 115 aa3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 M0R233 179 aa3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 LYRM1O43325 122 aa3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 LINC00305Q7Z4B0 112 aa3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 FAM216BQ8N7L0 139 aa3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 C4orf3Q8WVX3 66 aa3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 ZC2HC1AQ96GY0 325 aa3.45□□□□□ -1.86
CALCOCO2-226ENST00000575461 MYH10P35580 1976 aa3.44□□□□□ -1.86
CALCOCO2-226ENST00000575461 TRAV36DV7A0A075B6V5 113 aa3.44□□□□□ -1.86
CALCOCO2-226ENST00000575461 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
CALCOCO2-226ENST00000575461 OR8B8Q15620 311 aa3.44□□□□□ -1.86
CALCOCO2-226ENST00000575461 BRWD1Q9NSI6 2320 aa3.44□□□□□ -1.86
CALCOCO2-226ENST00000575461 BORCS7-ASMTA0A0B4J1R7 106 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 TCRBV4S1A1TA0A5B7 111 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 E7EUB6 86 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 IGLV1-51P01701 117 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 MT-ND6P03923 174 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 ARPC4P59998 168 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 CDK6Q00534 326 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 VMA21Q3ZAQ7 101 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 CCDC153Q494R4 210 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 C1orf137Q5JT78 98 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 C2orf82Q6UX34 121 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 Q8N814 137 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 OR4B1Q8NGF8 309 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 HYLS1Q96M11 299 aa3.43□□□□□ -1.86
CALCOCO2-226ENST00000575461 OR2T8A6NH00 312 aa3.42□□□□□ -1.86
CALCOCO2-226ENST00000575461 PCNX2A6NKB5 2137 aa3.42□□□□□ -1.86
CALCOCO2-226ENST00000575461 MRPS14O60783 128 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-226ENST00000575461 RNASE3P12724 160 aaKnown RBP3.42□□□□□ -1.86
CALCOCO2-226ENST00000575461 OR4C6Q8NH72 309 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms