RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 ZNF138P52744 262 aa13.12□□□□□ -0.31
CACNA1A-202ENST00000573710 Q96M66 194 aa13.12□□□□□ -0.31
CACNA1A-202ENST00000573710 HMGA2P52926 109 aa13.12□□□□□ -0.31
CACNA1A-202ENST00000573710 ACYP1P07311 99 aa13.12□□□□□ -0.31
CACNA1A-202ENST00000573710 TMEM133Q9H2Q1 129 aa13.12□□□□□ -0.31
CACNA1A-202ENST00000573710 GAGE12BA1L429 117 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 PLA2G10O15496 165 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 LY6HO94772 140 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 MESP2Q0VG99 397 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 NHSQ6T4R5 1651 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 PSG7Q13046 419 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 PLEKHB2Q96CS7 222 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 HOXB1P14653 301 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 RREB1Q92766 1687 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 NGFRP08138 427 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 SPACA3Q8IXA5 215 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 Q96MF0 132 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 XIRP1Q702N8 1843 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 VSIRQ9H7M9 311 aa13.11□□□□□ -0.31
CACNA1A-202ENST00000573710 PAX9P55771 341 aa13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 A0A0J9YY99 117 aa13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 KLF17Q5JT82 389 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 KLK9Q9UKQ9 250 aa13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 LINC00312Q9Y6C7 94 aa13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 CSRP2Q16527 193 aa13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 C15orf61A6NNL5 157 aa13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 IGKV1-39P01597 117 aa13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 IGKV1D-39P04432 117 aa13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 PRCDQ00LT1 54 aa13.1□□□□□ -0.31
CACNA1A-202ENST00000573710 OVOL1O14753 267 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 ZNF124Q15973 351 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 Q6AWC8 147 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 SAXO1Q8IYX7 474 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 PLXNA1Q9UIW2 1896 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 OR9G9P0C7N8 305 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 ROS1P08922 2347 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 F2Z2F3 143 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 CMC4P56277 68 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 GNB1LQ9BYB4 327 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 TEX38Q6PEX7 206 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 DEFB131AP59861 70 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 HSD52Q0P140 79 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 C1QTNF4Q9BXJ3 329 aa13.09□□□□□ -0.31
CACNA1A-202ENST00000573710 A0A0A6YYD4 124 aa13.08□□□□□ -0.32
CACNA1A-202ENST00000573710 A0A0G2JK05 382 aa13.08□□□□□ -0.32
CACNA1A-202ENST00000573710 A8MWP6 167 aa13.08□□□□□ -0.32
CACNA1A-202ENST00000573710 RNF166Q96A37 237 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-202ENST00000573710 Q6ZQT7 251 aa13.08□□□□□ -0.32
CACNA1A-202ENST00000573710 IGHG2P01859 326 aa13.08□□□□□ -0.32
CACNA1A-202ENST00000573710 TET2Q6N021 2002 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-202ENST00000573710 NEUROG3Q9Y4Z2 214 aa13.08□□□□□ -0.32
CACNA1A-202ENST00000573710 RNASE2P10153 161 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 KIR3DS1Q14943 382 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 PRR4Q16378 134 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 VWC2Q2TAL6 325 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 LCN12Q6JVE5 192 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 PRSS57Q6UWY2 283 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 H2BFSP57053 126 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 RUSC1-AS1Q66K80 236 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 SCN7AQ01118 1682 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 SHISA9B4DS77 424 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 RPL34P49207 117 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 SPINK13Q1W4C9 94 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 A0A1W2PRE2 83 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 HLA-DQB1P01920 261 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 TMEM30BQ3MIR4 351 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 LYZL1Q6UWQ5 148 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 AZU1P20160 251 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 XCL1P47992 114 aa13.07□□□□□ -0.32
CACNA1A-202ENST00000573710 PRSS23O95084 383 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 SORL1Q92673 2214 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 IGKV4-1P06312 121 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 EPOPA6NHQ4 379 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 NMBP08949 121 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 ZNF525Q8N782 197 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 TRPM3Q9HCF6 1732 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 BUB3O43684 328 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 IFITM1P13164 125 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 UBE2E1P51965 193 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 TRBV25-1A0A075B6N4 114 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 IGKV1-8A0A0C4DH67 115 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 A0A1W2PR77 199 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 GAGE12HA6NDE8 117 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 IQCF6A8MYZ5 107 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 Q5BKY6 102 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 KIAA1551Q9HCM1 1747 aa13.06□□□□□ -0.32
CACNA1A-202ENST00000573710 PVRIGQ6DKI7 326 aa13.05□□□□□ -0.32
CACNA1A-202ENST00000573710 BCORQ6W2J9 1755 aa13.05□□□□□ -0.32
CACNA1A-202ENST00000573710 CRYBA4P53673 196 aa13.05□□□□□ -0.32
CACNA1A-202ENST00000573710 CASC2Q6XLA1 102 aa13.05□□□□□ -0.32
CACNA1A-202ENST00000573710 CFHR1Q03591 330 aa13.05□□□□□ -0.32
CACNA1A-202ENST00000573710 PTPRFP10586 1907 aa13.05□□□□□ -0.32
CACNA1A-202ENST00000573710 RGPD3A6NKT7 1758 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-202ENST00000573710 ZNF672Q499Z4 452 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-202ENST00000573710 SEM1Q6ZVN7 128 aa13.04□□□□□ -0.32
CACNA1A-202ENST00000573710 PLPPR1Q8TBJ4 325 aa13.04□□□□□ -0.32
CACNA1A-202ENST00000573710 MALRD1Q5VYJ5 2156 aa13.04□□□□□ -0.32
CACNA1A-202ENST00000573710 CTSGP08311 255 aa13.04□□□□□ -0.32
CACNA1A-202ENST00000573710 ZNF503Q96F45 646 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms