RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 ZNF207O43670 478 aaKnown RBP9.8□□□□□ -0.84
CLK3-214ENST00000564096 ARL14EPLP0DKL9 152 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 GALR1P47211 349 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 PSMB3P49720 205 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 IL34Q6ZMJ4 242 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 SSX7Q7RTT5 188 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 OR8I2Q8N0Y5 310 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 OR9G4Q8NGQ1 327 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 DUX3Q96PT4 197 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 ZNF747Q9BV97 191 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 MANBALQ9NQG1 85 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 TMEM14CQ9P0S9 112 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 NF1P21359 2839 aa9.8□□□□□ -0.84
CLK3-214ENST00000564096 JMJD1CQ15652 2540 aa9.79□□□□□ -0.84
CLK3-214ENST00000564096 TMEM213A2RRL7 107 aa9.79□□□□□ -0.84
CLK3-214ENST00000564096 HELTA6NFD8 242 aa9.79□□□□□ -0.84
CLK3-214ENST00000564096 BUB3O43684 328 aa9.79□□□□□ -0.84
CLK3-214ENST00000564096 CD5P06127 495 aa9.79□□□□□ -0.84
CLK3-214ENST00000564096 ATF4P18848 351 aaPredicted RBP9.79□□□□□ -0.84
CLK3-214ENST00000564096 GCHFRP30047 84 aa9.79□□□□□ -0.84
CLK3-214ENST00000564096 TAGLN2P37802 199 aaKnown RBP9.79□□□□□ -0.84
CLK3-214ENST00000564096 MEOX2P50222 304 aa9.79□□□□□ -0.84
CLK3-214ENST00000564096 FGF8P55075 233 aaPredicted RBP9.79□□□□□ -0.84
CLK3-214ENST00000564096 SHISA2Q6UWI4 295 aa9.79□□□□□ -0.84
CLK3-214ENST00000564096 PCNPQ8WW12 178 aaKnown RBP9.79□□□□□ -0.84
CLK3-214ENST00000564096 OR51M1Q9H341 326 aa9.79□□□□□ -0.84
CLK3-214ENST00000564096 TRAV5A0A0B4J249 113 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 OVOL1O14753 267 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 GP9P14770 177 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 TM4SF20Q53R12 229 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 MORN5Q5VZ52 161 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 LEMD1Q68G75 181 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 HIST2H2BDQ6DRA6 164 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 LYPD6BQ8NI32 183 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 DYNLRB2Q8TF09 96 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 DLX4Q92988 240 aaPredicted RBP9.78□□□□□ -0.84
CLK3-214ENST00000564096 FAM167A-AS1Q96KT0 104 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 U3KQE9 123 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 ARL2-SNX15V9GYD0 113 aa9.78□□□□□ -0.84
CLK3-214ENST00000564096 IGHV3-49A0A0A0MS15 119 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 C2orf70A6NJV1 201 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 EIF3GO75821 320 aaKnown RBP eCLIP9.77□□□□□ -0.85
CLK3-214ENST00000564096 OR10J4P0C629 311 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 GUK1Q16774 197 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 SAMD13Q5VXD3 122 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 C16orf54Q6UWD8 224 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 SIGLEC15Q6ZMC9 328 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 RHPN1-AS1Q9BWJ2 59 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 GNG13Q9P2W3 67 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 SMPXQ9UHP9 88 aa9.77□□□□□ -0.85
CLK3-214ENST00000564096 IGHV3OR16-13A0A075B7E8 117 aa9.76□□□□□ -0.85
CLK3-214ENST00000564096 IGHV3-74A0A0B4J1X5 117 aa9.76□□□□□ -0.85
CLK3-214ENST00000564096 IGHV3-66A0A0C4DH42 116 aa9.76□□□□□ -0.85
CLK3-214ENST00000564096 CHEK1O14757 476 aa9.76□□□□□ -0.85
CLK3-214ENST00000564096 PYYP10082 97 aa9.76□□□□□ -0.85
CLK3-214ENST00000564096 HIST1H1EP10412 219 aaKnown RBP9.76□□□□□ -0.85
CLK3-214ENST00000564096 PDE6HQ13956 83 aa9.76□□□□□ -0.85
CLK3-214ENST00000564096 NDUFA5Q16718 116 aa9.76□□□□□ -0.85
CLK3-214ENST00000564096 GLMPQ8WWB7 406 aa9.76□□□□□ -0.85
CLK3-214ENST00000564096 A0A087X0K7 114 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 ZNF785A8K8V0 405 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 APOHP02749 345 aaPredicted RBP9.75□□□□□ -0.85
CLK3-214ENST00000564096 IGLC2P0DOY2 106 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 BCL2P10415 239 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 FOLR2P14207 255 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 CBLN1P23435 193 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 PMS2P11Q13670 270 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 FXYD5Q96DB9 178 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 TXNDC17Q9BRA2 123 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 MED9Q9NWA0 146 aa9.75□□□□□ -0.85
CLK3-214ENST00000564096 FBN3Q75N90 2809 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 ZNF253O75346 499 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 NBEAP1P0C6P0 100 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 RPL11P62913 178 aaKnown RBP9.74□□□□□ -0.85
CLK3-214ENST00000564096 COMMD7Q86VX2 200 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 LINC00482Q8N8I6 264 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 BLNKQ8WV28 456 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 ZNF503Q96F45 646 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 FAM210AQ96ND0 272 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 SLC50A1Q9BRV3 221 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 NKX6-2Q9C056 277 aaPredicted RBP9.74□□□□□ -0.85
CLK3-214ENST00000564096 SIGLEC8Q9NYZ4 499 aa9.74□□□□□ -0.85
CLK3-214ENST00000564096 TRBV19A0A075B6N1 114 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 A0A1W2PRE2 83 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 RAB19A4D1S5 217 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 LINC00862A6NCI5 91 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 MRPS12O15235 138 aaKnown RBP9.73□□□□□ -0.85
CLK3-214ENST00000564096 CSN3P07498 182 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 UBE2G2P60604 165 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 PSG9Q00887 426 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 TOR2AQ5JU69 321 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 TCF24Q7RTU0 167 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 SUN5Q8TC36 379 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 TCEAL7Q9BRU2 100 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 EIF5A2Q9GZV4 153 aaKnown RBP9.73□□□□□ -0.85
CLK3-214ENST00000564096 TMPRSS5Q9H3S3 457 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 AAMDCQ9H7C9 122 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 NRN1Q9NPD7 142 aa9.73□□□□□ -0.85
CLK3-214ENST00000564096 NIPBLQ6KC79 2804 aaeCLIP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms