RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PSMB3P49720 205 aa11.93□□□□□ -0.5
HDGFL3-203ENST00000563404 OR4B1Q8NGF8 309 aa11.93□□□□□ -0.5
HDGFL3-203ENST00000563404 NIPSNAP3BQ9BS92 247 aa11.93□□□□□ -0.5
HDGFL3-203ENST00000563404 NUP62P37198 522 aaPredicted RBP11.92□□□□□ -0.5
HDGFL3-203ENST00000563404 LYZP61626 148 aa11.92□□□□□ -0.5
HDGFL3-203ENST00000563404 FAM210BQ96KR6 192 aa11.92□□□□□ -0.5
HDGFL3-203ENST00000563404 C20orf173Q96LM9 149 aa11.92□□□□□ -0.5
HDGFL3-203ENST00000563404 C17orf77Q96MU5 243 aa11.92□□□□□ -0.5
HDGFL3-203ENST00000563404 LRP1BQ9NZR2 4599 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 IGKV1OR2-108A0A075B7D4 117 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 ADAP1O75689 374 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 ID1P41134 155 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 PAX9P55771 341 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 PSG9Q00887 426 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 ID3Q02535 119 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 OR2F1Q13607 317 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 C1orf194Q5T5A4 169 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 FAM78BQ5VT40 261 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 UBE2DNLQ8IWF7 75 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 ALG5Q9Y673 324 aa11.91□□□□□ -0.5
HDGFL3-203ENST00000563404 A0A0J9YX75 114 aa11.9□□□□□ -0.5
HDGFL3-203ENST00000563404 SSNA1O43805 119 aa11.9□□□□□ -0.5
HDGFL3-203ENST00000563404 HTN3P15516 51 aa11.9□□□□□ -0.5
HDGFL3-203ENST00000563404 ATP5IP56385 69 aaPredicted RBP11.9□□□□□ -0.5
HDGFL3-203ENST00000563404 CYCSP99999 105 aaKnown RBP11.9□□□□□ -0.5
HDGFL3-203ENST00000563404 SLC35E1Q96K37 410 aa11.9□□□□□ -0.5
HDGFL3-203ENST00000563404 C2orf50Q96LR7 162 aa11.9□□□□□ -0.5
HDGFL3-203ENST00000563404 YTHDF2Q9Y5A9 579 aaKnown RBP11.9□□□□□ -0.5
HDGFL3-203ENST00000563404 MUC4Q99102 2169 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 LOC102723971A0A1B0GUV8 181 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 ISLRO14498 428 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 MED6O75586 246 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 IAH1Q2TAA2 248 aaPredicted RBP11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 SPATA31B1PQ5VZV4 182 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 AMTNQ6UX39 209 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 Q6ZNX1 250 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 ZNF575Q86XF7 245 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 OR4D5Q8NGN0 318 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 OR1S1Q8NH92 325 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 TRGV9Q99603 122 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 KRTAP4-5Q9BYR2 181 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 PFDN2Q9UHV9 154 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 GOLT1BQ9Y3E0 138 aa11.89□□□□□ -0.51
HDGFL3-203ENST00000563404 NACAE9PAV3 2078 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 TEX48A0A1B0GUV7 120 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 A8MTW9 85 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 HBE1P02100 147 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 PRM2P04554 102 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 IAPPP10997 89 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 IL15RAQ13261 267 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 RNF212Q495C1 297 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 EBLN2Q6P2I7 272 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 TMEM88Q6PEY1 159 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 OR8I2Q8N0Y5 310 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 THAP8Q8NA92 274 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 ZBTB8BQ8NAP8 495 aaPredicted RBP11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 SLC25A32Q9H2D1 315 aa11.88□□□□□ -0.51
HDGFL3-203ENST00000563404 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
HDGFL3-203ENST00000563404 PPP1R14BQ96C90 147 aa11.87□□□□□ -0.51
HDGFL3-203ENST00000563404 CIB3Q96Q77 187 aaPredicted RBP11.87□□□□□ -0.51
HDGFL3-203ENST00000563404 NMES1Q9C002 83 aa11.87□□□□□ -0.51
HDGFL3-203ENST00000563404 MED28Q9H204 178 aa11.87□□□□□ -0.51
HDGFL3-203ENST00000563404 DOK5Q9P104 306 aa11.87□□□□□ -0.51
HDGFL3-203ENST00000563404 PRSS46E5RG02 174 aa11.86□□□□□ -0.51
HDGFL3-203ENST00000563404 FABP1P07148 127 aa11.86□□□□□ -0.51
HDGFL3-203ENST00000563404 RRN3P1Q2M238 152 aa11.86□□□□□ -0.51
HDGFL3-203ENST00000563404 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.86□□□□□ -0.51
HDGFL3-203ENST00000563404 TMEM182Q6ZP80 229 aaPredicted RBP11.86□□□□□ -0.51
HDGFL3-203ENST00000563404 C16orf92Q96LL3 132 aa11.86□□□□□ -0.51
HDGFL3-203ENST00000563404 RPRMQ9NS64 109 aa11.86□□□□□ -0.51
HDGFL3-203ENST00000563404 ZNF98A6NK75 572 aa11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 SYNGR2O43760 224 aa11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 GATA2P23769 480 aaPredicted RBP11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 TAS2R30P59541 319 aa11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 DAD1P61803 113 aa11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 RRAS2P62070 204 aaPredicted RBP11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 IGFL4Q6B9Z1 124 aa11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 IGF2BP2-AS1Q96M15 143 aa11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 RSG1Q9BU20 258 aa11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 SLC25A22Q9H936 323 aa11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 GSKIPQ9P0R6 139 aa11.85□□□□□ -0.51
HDGFL3-203ENST00000563404 FAM25EA8MYX2 175 aa11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 CCSO14618 274 aa11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 GOSR2O14653 212 aa11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 CRXO43186 299 aaPredicted RBP11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 H2BFSP57053 126 aa11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 RAB11AP62491 216 aa11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 C1orf134Q5TEV5 83 aa11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 MAGT1Q9H0U3 335 aa11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 MGAT4CQ9UBM8 478 aa11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 PAIP2BQ9ULR5 123 aaKnown RBP11.84□□□□□ -0.51
HDGFL3-203ENST00000563404 TRAV8-2A0A0B4J237 113 aa11.83□□□□□ -0.52
HDGFL3-203ENST00000563404 ZNF705GA8MUZ8 300 aaPredicted RBP11.83□□□□□ -0.52
HDGFL3-203ENST00000563404 MBPP02686 304 aaPredicted RBP11.83□□□□□ -0.52
HDGFL3-203ENST00000563404 GALR1P47211 349 aa11.83□□□□□ -0.52
HDGFL3-203ENST00000563404 MEOX2P50222 304 aa11.83□□□□□ -0.52
HDGFL3-203ENST00000563404 RPP30P78346 268 aaKnown RBP11.83□□□□□ -0.52
HDGFL3-203ENST00000563404 SAMD13Q5VXD3 122 aa11.83□□□□□ -0.52
HDGFL3-203ENST00000563404 OR11H7Q8NGC8 314 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms