RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 A0A1W2PRF3 423 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 A0A1W2PRM7 423 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 NMUP48645 174 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 HERV-K104P63124 156 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 COQ2Q96H96 371 aa10.69□□□□□ -0.7
CLK3-206ENST00000562078 C12orf77C9JDV5 145 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 ROS1P08922 2347 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 SPINK8P0C7L1 97 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 MOB3BQ86TA1 216 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 AMMECR1Q9Y4X0 333 aaPredicted RBP10.68□□□□□ -0.7
CLK3-206ENST00000562078 TRAV5A0A0B4J249 113 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 TEX50A0A1B0GTY4 177 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 AMTNQ6UX39 209 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 Q8TCH9 128 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 DDB2Q92466 427 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 GALMQ96C23 342 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 FAM234AQ9H0X4 552 aa10.68□□□□□ -0.7
CLK3-206ENST00000562078 IGHV3-43A0A0B4J1X8 118 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 A0A0G2JNJ9 132 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 DEFB108AA8MXU0 73 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 APOHP02749 345 aaPredicted RBP10.67□□□□□ -0.7
CLK3-206ENST00000562078 MT-ATP8P03928 68 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 IGHV3-43DP0DP04 118 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 MORN5Q5VZ52 161 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 LINC00322Q6ZN03 302 aaPredicted RBP10.67□□□□□ -0.7
CLK3-206ENST00000562078 BCL6BQ8N143 479 aaPredicted RBP10.67□□□□□ -0.7
CLK3-206ENST00000562078 DPF1Q92782 380 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 NDFIP1Q9BT67 221 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 C7orf69Q9H7B7 122 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 Q9UFV3 132 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 TRGV8A0A0C4DH27 118 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 SIVA1O15304 175 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 FCGR3BO75015 233 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 FAM27E3Q08E93 113 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 PRR7Q8TB68 274 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 AP5S1Q9NUS5 200 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 DYSFO75923 2080 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 PKD1L2Q7Z442 2459 aa10.67□□□□□ -0.7
CLK3-206ENST00000562078 CLEC3BP05452 202 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 FAM106CPP0CH98 169 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 FAM106AQ4KMX7 169 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 SPRNQ5BIV9 151 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 PHLDA1Q8WV24 401 aaPredicted RBP10.66□□□□□ -0.7
CLK3-206ENST00000562078 OOEPA6NGQ2 149 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 CHEK1O14757 476 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 PF4V1P10720 104 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 GNG5P63218 68 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
CLK3-206ENST00000562078 MZT1Q08AG7 82 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 EDDM3AQ14507 147 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 C22orf34Q6ZV56 151 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 CD177Q8N6Q3 437 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 CDIP1Q9H305 208 aa10.66□□□□□ -0.7
CLK3-206ENST00000562078 TPRP12270 2363 aaKnown RBP10.66□□□□□ -0.7
CLK3-206ENST00000562078 ADGRG4Q8IZF6 3080 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 IGKV1OR2-108A0A075B7D4 117 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 PEX7O00628 323 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 IGHV3-13P01766 116 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 CACNG7P62955 275 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 SYT8Q8NBV8 401 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 OR13A1Q8NGR1 328 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 GPR82Q96P67 336 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
CLK3-206ENST00000562078 LINC00312Q9Y6C7 94 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 IGHV3OR15-7A0A075B7D8 119 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 TRBV7-9A0A0J9YWB2 115 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 SPRY3O43610 288 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 PPIFP30405 207 aaKnown RBP10.65□□□□□ -0.7
CLK3-206ENST00000562078 DUTP33316 252 aaKnown RBP10.65□□□□□ -0.7
CLK3-206ENST00000562078 GLRXP35754 106 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 CACNG8Q8WXS5 425 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 DCTN5Q9BTE1 182 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 TTTY13Q9BZ97 58 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 TCF19Q9Y242 345 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 POLEQ07864 2286 aa10.65□□□□□ -0.7
CLK3-206ENST00000562078 SRRM5B3KS81 715 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 B5MCH6 92 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 BRI3O95415 125 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 LTAP01374 205 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 PYYP10082 97 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 PRDX2P32119 198 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 LOXL1Q08397 574 aaPredicted RBP10.64□□□□□ -0.71
CLK3-206ENST00000562078 MOGAT3Q86VF5 341 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 TTC9CQ8N5M4 171 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
CLK3-206ENST00000562078 SIGLEC8Q9NYZ4 499 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 KALRNO60229 2985 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 IGKV1D-17A0A075B6S4 117 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 C16orf97H3BN30 126 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 TNFRSF13BO14836 293 aaPredicted RBP10.64□□□□□ -0.71
CLK3-206ENST00000562078 CT45A6P0DMU7 189 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 CT45A5P0DMU8 189 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 CT45A7P0DMV0 189 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 GPR12P47775 334 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 FXYD7P58549 80 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 CT45A1Q5HYN5 189 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 ZNF329Q86UD4 541 aa10.64□□□□□ -0.71
CLK3-206ENST00000562078 CT45A3Q8NHU0 189 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms