RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 POU2AF1Q16633 256 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 PSMG4Q5JS54 123 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 MTURNQ8N3F0 131 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 LINC00479Q96M42 142 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 KLF12Q9Y4X4 402 aa11.19□□□□□ -0.62
RABGGTA-220ENST00000560998 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 TEX48A0A1B0GUV7 120 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 VSTM5A8MXK1 200 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 SHISA9B4DS77 424 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 OR1L4Q8NGR5 311 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 GPR82Q96P67 336 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 VKORC1Q9BQB6 163 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 GTSF1LQ9H1H1 148 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 NGBQ9NPG2 151 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 AP5S1Q9NUS5 200 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 SIGLEC8Q9NYZ4 499 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 PRNDQ9UKY0 176 aa11.18□□□□□ -0.62
RABGGTA-220ENST00000560998 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 HAX1O00165 279 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 CT45A6P0DMU7 189 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 CT45A5P0DMU8 189 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 CT45A7P0DMV0 189 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 RPL24P83731 157 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 SMAGPQ0VAQ4 97 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 LGALS9BQ3B8N2 356 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 C2orf83Q53S99 150 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 LGALS9CQ6DKI2 356 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 NEU4Q8WWR8 484 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 RNASE6Q93091 150 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 PERPQ96FX8 193 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 PAXXQ9BUH6 204 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 TMUB1Q9BVT8 246 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 ZNRD1Q9P1U0 126 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 MSRB2Q9Y3D2 182 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 PTPRQQ9UMZ3 2332 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 ROS1P08922 2347 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 SRRM4A7MD48 611 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 E7EQL1 145 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 H0Y8G0 127 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 TNFRSF13BO14836 293 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 ZNF207O43670 478 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 P01737 135 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 SAMD5Q5TGI4 173 aa11.17□□□□□ -0.62
RABGGTA-220ENST00000560998 IGKV1OR2-108A0A075B7D4 117 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 GOSR1O95249 250 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 MYCNOSP40205 109 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 PRCDQ00LT1 54 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 TMEM200BQ69YZ2 307 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 GATD1Q8NB37 220 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 OR1L8Q8NGR8 309 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 CCL17Q92583 94 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 FMC1Q96HJ9 113 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 ZNF48Q96MX3 618 aaPredicted RBP11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 MLST8Q9BVC4 326 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 SMIM13P0DJ93 91 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 CCL3L1P16619 93 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 COL8A2P25067 703 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 ZNF833PQ6ZTB9 187 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 GTSF1Q8WW33 167 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 CACNG8Q8WXS5 425 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 THYN1Q9P016 225 aa11.16□□□□□ -0.62
RABGGTA-220ENST00000560998 TLN1Q9Y490 2541 aaKnown RBP11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 DCHS1Q96JQ0 3298 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 A0A1B0GW15 77 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 F8W1H4 67 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 SNAI2O43623 268 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 CT45A10P0DMU9 189 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 MYOD1P15172 320 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 RAB9AP51151 201 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 CKS1BP61024 79 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 FOXE3Q13461 319 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 LYPD2Q6UXB3 125 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 STXBP6Q8NFX7 210 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 BLNKQ8WV28 456 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 PGLYRP4Q96LB8 373 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 DYNLRB1Q9NP97 96 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 EPDR1Q9UM22 224 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 HILPDAQ9Y5L2 63 aa11.15□□□□□ -0.62
RABGGTA-220ENST00000560998 NPIPB6E9PJ23 425 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 UPK2O00526 184 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 IGKV1-16P04430 117 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 S100A7AQ86SG5 101 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 DAZAP1Q96EP5 407 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 MCRIP2Q9BUT9 160 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 TSSC4Q9Y5U2 329 aaPredicted RBP11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 NDUFB3O43676 98 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 CD69Q07108 199 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 Q5PR19 223 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 RAB37Q96AX2 223 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 FXYD5Q96DB9 178 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 MRAP2Q96G30 205 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 VGLL1Q99990 258 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 MRPL20Q9BYC9 149 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 CTSZQ9UBR2 303 aa11.14□□□□□ -0.63
RABGGTA-220ENST00000560998 ARFGEF3Q5TH69 2177 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 LTAP01374 205 aa11.13□□□□□ -0.63
RABGGTA-220ENST00000560998 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms