RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 LRTM2Q8N967 370 aa16.91■□□□□ 0.3
PBX1-217ENST00000559578 BPIFCQ8NFQ6 507 aa16.91■□□□□ 0.3
PBX1-217ENST00000559578 OR4D5Q8NGN0 318 aa16.91■□□□□ 0.3
PBX1-217ENST00000559578 DUSP14O95147 198 aaKnown RBP16.9■□□□□ 0.3
PBX1-217ENST00000559578 INSP01308 110 aa16.9■□□□□ 0.3
PBX1-217ENST00000559578 ORM2P19652 201 aa16.9■□□□□ 0.3
PBX1-217ENST00000559578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.9■□□□□ 0.3
PBX1-217ENST00000559578 ZNF575Q86XF7 245 aa16.9■□□□□ 0.3
PBX1-217ENST00000559578 ATG101Q9BSB4 218 aa16.9■□□□□ 0.3
PBX1-217ENST00000559578 TMEM147Q9BVK8 224 aa16.9■□□□□ 0.3
PBX1-217ENST00000559578 LYRM9A8MSI8 78 aa16.89■□□□□ 0.29
PBX1-217ENST00000559578 SYNGR2O43760 224 aa16.89■□□□□ 0.29
PBX1-217ENST00000559578 SFT2D2O95562 160 aa16.89■□□□□ 0.29
PBX1-217ENST00000559578 HOXB5P09067 269 aa16.89■□□□□ 0.29
PBX1-217ENST00000559578 CNN1P51911 297 aaKnown RBP16.89■□□□□ 0.29
PBX1-217ENST00000559578 PPP1R1AQ13522 171 aa16.89■□□□□ 0.29
PBX1-217ENST00000559578 C17orf77Q96MU5 243 aa16.89■□□□□ 0.29
PBX1-217ENST00000559578 ZNF705GA8MUZ8 300 aaPredicted RBP16.88■□□□□ 0.29
PBX1-217ENST00000559578 GATA2P23769 480 aaPredicted RBP16.88■□□□□ 0.29
PBX1-217ENST00000559578 B2MP61769 119 aa16.88■□□□□ 0.29
PBX1-217ENST00000559578 AKR1C1Q04828 323 aa16.88■□□□□ 0.29
PBX1-217ENST00000559578 SPINK13Q1W4C9 94 aa16.88■□□□□ 0.29
PBX1-217ENST00000559578 SPANXN5Q5MJ07 72 aa16.88■□□□□ 0.29
PBX1-217ENST00000559578 OR11H7Q8NGC8 314 aa16.88■□□□□ 0.29
PBX1-217ENST00000559578 SLC25A21Q9BQT8 299 aaPredicted RBP16.88■□□□□ 0.29
PBX1-217ENST00000559578 V9GYH0 126 aa16.88■□□□□ 0.29
PBX1-217ENST00000559578 DYNC1H1Q14204 4646 aaKnown RBP16.87■□□□□ 0.29
PBX1-217ENST00000559578 RYR1P21817 5038 aa16.87■□□□□ 0.29
PBX1-217ENST00000559578 PRSS46E5RG02 174 aa16.87■□□□□ 0.29
PBX1-217ENST00000559578 M0R2Z0 102 aa16.87■□□□□ 0.29
PBX1-217ENST00000559578 H3BP45 60 aa16.86■□□□□ 0.29
PBX1-217ENST00000559578 CRXO43186 299 aaPredicted RBP16.86■□□□□ 0.29
PBX1-217ENST00000559578 FGL1Q08830 312 aa16.86■□□□□ 0.29
PBX1-217ENST00000559578 TMEM182Q6ZP80 229 aaPredicted RBP16.86■□□□□ 0.29
PBX1-217ENST00000559578 PRM2P04554 102 aa16.85■□□□□ 0.29
PBX1-217ENST00000559578 DEFB130BP0DP73 79 aa16.85■□□□□ 0.29
PBX1-217ENST00000559578 DEFB130AP0DP74 79 aa16.85■□□□□ 0.29
PBX1-217ENST00000559578 TSPOP30536 169 aa16.85■□□□□ 0.29
PBX1-217ENST00000559578 IGFL4Q6B9Z1 124 aa16.85■□□□□ 0.29
PBX1-217ENST00000559578 RNF182Q8N6D2 247 aa16.85■□□□□ 0.29
PBX1-217ENST00000559578 TRAV8-2A0A0B4J237 113 aa16.84■□□□□ 0.29
PBX1-217ENST00000559578 S100A5P33763 92 aa16.84■□□□□ 0.29
PBX1-217ENST00000559578 ZNF738Q8NE65 137 aa16.84■□□□□ 0.29
PBX1-217ENST00000559578 STRAPQ9Y3F4 350 aaKnown RBP16.84■□□□□ 0.29
PBX1-217ENST00000559578 CCDC160A6NGH7 325 aa16.83■□□□□ 0.28
PBX1-217ENST00000559578 F5H768 121 aa16.83■□□□□ 0.28
PBX1-217ENST00000559578 ACOT7LQ6ZUV0 252 aa16.83■□□□□ 0.28
PBX1-217ENST00000559578 BAP18Q8IXM2 172 aa16.83■□□□□ 0.28
PBX1-217ENST00000559578 SMCO3A2RU48 225 aa16.82■□□□□ 0.28
PBX1-217ENST00000559578 RPL7P18124 248 aaKnown RBP16.82■□□□□ 0.28
PBX1-217ENST00000559578 RAP2BP61225 183 aa16.82■□□□□ 0.28
PBX1-217ENST00000559578 TMEM144Q7Z5S9 345 aa16.82■□□□□ 0.28
PBX1-217ENST00000559578 DEDD2Q8WXF8 326 aa16.82■□□□□ 0.28
PBX1-217ENST00000559578 SLC25A39Q9BZJ4 359 aaPredicted RBP16.82■□□□□ 0.28
PBX1-217ENST00000559578 TRAV12-2A0A075B6T6 113 aa16.81■□□□□ 0.28
PBX1-217ENST00000559578 H3BRN7 92 aa16.81■□□□□ 0.28
PBX1-217ENST00000559578 BOLA2-SMG1P6H3BVE0 249 aa16.81■□□□□ 0.28
PBX1-217ENST00000559578 NUDT3O95989 172 aa16.81■□□□□ 0.28
PBX1-217ENST00000559578 IL5P05113 134 aa16.81■□□□□ 0.28
PBX1-217ENST00000559578 LINC01587Q99440 93 aa16.81■□□□□ 0.28
PBX1-217ENST00000559578 SHANK2-AS3Q9BTD1 123 aa16.81■□□□□ 0.28
PBX1-217ENST00000559578 PPP1R14DQ9NXH3 145 aa16.81■□□□□ 0.28
PBX1-217ENST00000559578 HIGD1AQ9Y241 93 aa16.81■□□□□ 0.28
PBX1-217ENST00000559578 NBDYA0A0U1RRE5 68 aa16.8■□□□□ 0.28
PBX1-217ENST00000559578 ADAP1O75689 374 aa16.8■□□□□ 0.28
PBX1-217ENST00000559578 ATP5G1P05496 136 aa16.8■□□□□ 0.28
PBX1-217ENST00000559578 ATP5G3P48201 142 aa16.8■□□□□ 0.28
PBX1-217ENST00000559578 RHOBP62745 196 aa16.8■□□□□ 0.28
PBX1-217ENST00000559578 CYP2G1PQ6ZSU1 146 aa16.8■□□□□ 0.28
PBX1-217ENST00000559578 TMEM256Q8N2U0 113 aa16.8■□□□□ 0.28
PBX1-217ENST00000559578 PLAC8L1A1L4L8 177 aa16.79■□□□□ 0.28
PBX1-217ENST00000559578 HYPMO75409 117 aa16.79■□□□□ 0.28
PBX1-217ENST00000559578 AZU1P20160 251 aa16.79■□□□□ 0.28
PBX1-217ENST00000559578 CCL18P55774 89 aa16.79■□□□□ 0.28
PBX1-217ENST00000559578 POLR2GP62487 172 aaKnown RBP eCLIP16.79■□□□□ 0.28
PBX1-217ENST00000559578 HIST1H1AQ02539 215 aaPredicted RBP16.79■□□□□ 0.28
PBX1-217ENST00000559578 TNP2Q05952 138 aa16.79■□□□□ 0.28
PBX1-217ENST00000559578 CCDC190Q86UF4 302 aa16.79■□□□□ 0.28
PBX1-217ENST00000559578 C6orf223Q8N319 242 aa16.79■□□□□ 0.28
PBX1-217ENST00000559578 ZNRF2Q8NHG8 242 aa16.79■□□□□ 0.28
PBX1-217ENST00000559578 PSENENQ9NZ42 101 aa16.79■□□□□ 0.28
PBX1-217ENST00000559578 C9orf170A2RU37 121 aa16.78■□□□□ 0.28
PBX1-217ENST00000559578 CBY3A6NI87 242 aa16.78■□□□□ 0.28
PBX1-217ENST00000559578 C16orf90A8MZG2 172 aa16.78■□□□□ 0.28
PBX1-217ENST00000559578 UBE2MP61081 183 aaKnown RBP16.78■□□□□ 0.28
PBX1-217ENST00000559578 ID3Q02535 119 aa16.78■□□□□ 0.28
PBX1-217ENST00000559578 FCN2Q15485 313 aa16.78■□□□□ 0.28
PBX1-217ENST00000559578 S100A7AQ86SG5 101 aa16.78■□□□□ 0.28
PBX1-217ENST00000559578 OR8A1Q8NGG7 326 aa16.78■□□□□ 0.28
PBX1-217ENST00000559578 LRRC20Q8TCA0 184 aa16.78■□□□□ 0.28
PBX1-217ENST00000559578 OR5G3P0C626 314 aa16.77■□□□□ 0.28
PBX1-217ENST00000559578 LINC00869P0C866 280 aa16.77■□□□□ 0.28
PBX1-217ENST00000559578 CXCL3P19876 107 aa16.77■□□□□ 0.28
PBX1-217ENST00000559578 TAS2R60P59551 318 aa16.77■□□□□ 0.28
PBX1-217ENST00000559578 SELENOTP62341 195 aa16.77■□□□□ 0.28
PBX1-217ENST00000559578 C16orf74Q96GX8 76 aa16.77■□□□□ 0.28
PBX1-217ENST00000559578 KRTAP4-5Q9BYR2 181 aa16.77■□□□□ 0.28
PBX1-217ENST00000559578 SSSCA1O60232 199 aa16.76■□□□□ 0.27
PBX1-217ENST00000559578 HTN1P15515 57 aa16.76■□□□□ 0.27
PBX1-217ENST00000559578 INPP1P49441 399 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms