RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 FAM222AQ5U5X8 452 aa10.13□□□□□ -0.79
SNX6-210ENST00000557341 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.13□□□□□ -0.79
SNX6-210ENST00000557341 TMEM182Q6ZP80 229 aaPredicted RBP10.13□□□□□ -0.79
SNX6-210ENST00000557341 CYP2G1PQ6ZSU1 146 aa10.13□□□□□ -0.79
SNX6-210ENST00000557341 SCRT1Q9BWW7 348 aa10.13□□□□□ -0.79
SNX6-210ENST00000557341 DKK2Q9UBU2 259 aa10.13□□□□□ -0.79
SNX6-210ENST00000557341 LOC102723971A0A1B0GUV8 181 aa10.12□□□□□ -0.79
SNX6-210ENST00000557341 CENPXA8MT69 81 aa10.12□□□□□ -0.79
SNX6-210ENST00000557341 RRN3P1Q2M238 152 aa10.12□□□□□ -0.79
SNX6-210ENST00000557341 C4orf46Q504U0 113 aa10.12□□□□□ -0.79
SNX6-210ENST00000557341 C1orf158Q8N1D5 194 aa10.12□□□□□ -0.79
SNX6-210ENST00000557341 C17orf77Q96MU5 243 aa10.12□□□□□ -0.79
SNX6-210ENST00000557341 NIPSNAP3BQ9BS92 247 aa10.12□□□□□ -0.79
SNX6-210ENST00000557341 SLC25A39Q9BZJ4 359 aaPredicted RBP10.12□□□□□ -0.79
SNX6-210ENST00000557341 FLVCR2Q9UPI3 526 aa10.12□□□□□ -0.79
SNX6-210ENST00000557341 PMS2P5A8MQ11 134 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 DUSP14O95147 198 aaKnown RBP10.11□□□□□ -0.79
SNX6-210ENST00000557341 SCGB1D2O95969 90 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 LINC00869P0C866 280 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 RPL7P18124 248 aaKnown RBP10.11□□□□□ -0.79
SNX6-210ENST00000557341 SELENOTP62341 195 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 FGL1Q08830 312 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 AMTNQ6UX39 209 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 S100A7AQ86SG5 101 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 POM121L12Q8N7R1 296 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 FAM210BQ96KR6 192 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 IGF2BP2-AS1Q96M15 143 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 SHANK2-AS3Q9BTD1 123 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 TMEM208Q9BTX3 173 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 HIGD1AQ9Y241 93 aa10.11□□□□□ -0.79
SNX6-210ENST00000557341 YTHDF2Q9Y5A9 579 aaKnown RBP10.11□□□□□ -0.79
SNX6-210ENST00000557341 LINC00854A0A1B0GVQ3 168 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 FNDC10F2Z333 226 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 HYPMO75409 117 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 INSP01308 110 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 OR5G3P0C626 314 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 METTL15P1P0C7V9 234 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 ANXA7P20073 488 aaKnown RBP10.1□□□□□ -0.79
SNX6-210ENST00000557341 BTCP35070 178 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 CNN1P51911 297 aaKnown RBP10.1□□□□□ -0.79
SNX6-210ENST00000557341 PLP1P60201 277 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 RRAS2P62070 204 aaPredicted RBP10.1□□□□□ -0.79
SNX6-210ENST00000557341 DLK1P80370 383 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 OXA1LQ15070 435 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 IAH1Q2TAA2 248 aaPredicted RBP10.1□□□□□ -0.79
SNX6-210ENST00000557341 TMEM14EPQ6UXP3 125 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 LINC00336Q6ZUF6 198 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 RNF182Q8N6D2 247 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 ZNF738Q8NE65 137 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 MGAT4CQ9UBM8 478 aa10.1□□□□□ -0.79
SNX6-210ENST00000557341 DNAH2Q9P225 4427 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 TRAV8-2A0A0B4J237 113 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 TSC22D2O75157 780 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 CCNKO75909 580 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 SPINK13Q1W4C9 94 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 TEPPQ6URK8 271 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 OR11H7Q8NGC8 314 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 OR10P1Q8NGE3 313 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 UHRF2Q96PU4 802 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 SDHCQ99643 169 aaPredicted RBP10.09□□□□□ -0.79
SNX6-210ENST00000557341 NPVFQ9HCQ7 196 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 RNF24Q9Y225 148 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 HERC2O95714 4834 aa10.09□□□□□ -0.79
SNX6-210ENST00000557341 FAT2Q9NYQ8 4349 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 A0A087X0K7 114 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 K7EPK0 472 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 M0R2Z0 102 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 IL7P13232 177 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 HTN3P15516 51 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 TAS2R30P59541 319 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 SLC38A11Q08AI6 406 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 CNPY1Q3B7I2 92 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 IGFL4Q6B9Z1 124 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 UBE2DNLQ8IWF7 75 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 ZBTB8BQ8NAP8 495 aaPredicted RBP10.08□□□□□ -0.8
SNX6-210ENST00000557341 MITD1Q8WV92 249 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 ARL6Q9H0F7 186 aa10.08□□□□□ -0.8
SNX6-210ENST00000557341 RCL1Q9Y2P8 373 aaKnown RBP10.08□□□□□ -0.8
SNX6-210ENST00000557341 PKHD1P08F94 4074 aa10.07□□□□□ -0.8
SNX6-210ENST00000557341 BOLA2-SMG1P6H3BVE0 249 aa10.07□□□□□ -0.8
SNX6-210ENST00000557341 B2MP61769 119 aa10.07□□□□□ -0.8
SNX6-210ENST00000557341 DAD1P61803 113 aa10.07□□□□□ -0.8
SNX6-210ENST00000557341 ZNF546Q86UE3 836 aa10.07□□□□□ -0.8
SNX6-210ENST00000557341 BAP18Q8IXM2 172 aa10.07□□□□□ -0.8
SNX6-210ENST00000557341 C20orf85Q9H1P6 137 aa10.07□□□□□ -0.8
SNX6-210ENST00000557341 ARV1Q9H2C2 271 aa10.07□□□□□ -0.8
SNX6-210ENST00000557341 GSKIPQ9P0R6 139 aa10.07□□□□□ -0.8
SNX6-210ENST00000557341 CRXO43186 299 aaPredicted RBP10.06□□□□□ -0.8
SNX6-210ENST00000557341 CXCL3P19876 107 aa10.06□□□□□ -0.8
SNX6-210ENST00000557341 HIST1H1AQ02539 215 aaPredicted RBP10.06□□□□□ -0.8
SNX6-210ENST00000557341 PXDC1Q5TGL8 231 aa10.06□□□□□ -0.8
SNX6-210ENST00000557341 LRRC20Q8TCA0 184 aa10.06□□□□□ -0.8
SNX6-210ENST00000557341 PLA2G2EQ9NZK7 142 aa10.06□□□□□ -0.8
SNX6-210ENST00000557341 LYRM9A8MSI8 78 aa10.05□□□□□ -0.8
SNX6-210ENST00000557341 GOSR2O14653 212 aa10.05□□□□□ -0.8
SNX6-210ENST00000557341 CXCL2P19875 107 aa10.05□□□□□ -0.8
SNX6-210ENST00000557341 TSPOP30536 169 aa10.05□□□□□ -0.8
SNX6-210ENST00000557341 RHOBP62745 196 aa10.05□□□□□ -0.8
SNX6-210ENST00000557341 OR8A1Q8NGG7 326 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms