RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 IGHG2P01859 326 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 FLG2Q5D862 2391 aaPredicted RBP7.36□□□□□ -1.23
SYNE3-205ENST00000557275 HTN3P15516 51 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 GATA2P23769 480 aaPredicted RBP7.36□□□□□ -1.23
SYNE3-205ENST00000557275 TAX1BP3O14907 124 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 CEACAM1P13688 526 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 TICRRQ7Z2Z1 1910 aa7.36□□□□□ -1.23
SYNE3-205ENST00000557275 LY6EQ16553 131 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 MPV17L2Q567V2 206 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 LIMS2Q7Z4I7 341 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 FAM223BA6NKX1 122 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 FAM223AQ8IWN6 122 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 MUC21A0A0G2JKD1 596 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 MUC21A0A140T8X8 626 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 MUC21Q5SSG8 566 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.35□□□□□ -1.23
SYNE3-205ENST00000557275 C2CD3Q4AC94 2353 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 SYNJ2BPP57105 145 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 NLRC5Q86WI3 1866 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 K7EP13 123 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 CCL3L1P16619 93 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 UBE2BP63146 152 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 BRK1Q8WUW1 75 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 PRO1854Q9UHT4 67 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 MIR17HGQ75NE6 70 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 MESP1Q9BRJ9 268 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 A0A087X0K7 114 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 A0A0J9YW62 118 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 LYL1P12980 280 aa7.35□□□□□ -1.23
SYNE3-205ENST00000557275 IGFBPL1Q8WX77 278 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 H3BTX0 84 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 TMEM52Q8NDY8 209 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 RPL39P5Q59GN2 51 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 LIME1Q9H400 295 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 CFHR2P36980 270 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 C18orf12Q96KH6 178 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 K7EP34 96 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 Q6ZVH6 145 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 V9GYY9 64 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 SHISA9B4DS77 424 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 TMEM243Q9BU79 118 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 IGHV3-64A0A075B6Q5 118 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 ZC2HC1BQ5TFG8 222 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 CSTL1Q9H114 145 aa7.34□□□□□ -1.23
SYNE3-205ENST00000557275 TRBV25-1A0A075B6N4 114 aa7.34□□□□□ -1.24
SYNE3-205ENST00000557275 VWA8A3KMH1 1905 aa7.34□□□□□ -1.24
SYNE3-205ENST00000557275 TRBV6-7A0A0A0MS04 114 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 SRRM4A7MD48 611 aaKnown RBP7.33□□□□□ -1.24
SYNE3-205ENST00000557275 ZNF876PQ49A33 203 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 C1QTNF5Q9BXJ0 243 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 TMEM133Q9H2Q1 129 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 ATP5EP56381 51 aaPredicted RBP7.33□□□□□ -1.24
SYNE3-205ENST00000557275 IMMP1LQ96LU5 166 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 ORMDL1Q9P0S3 153 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 BAALCQ8WXS3 180 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 GLMPQ8WWB7 406 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 C12orf77C9JDV5 145 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 SUPT4H1P63272 117 aaKnown RBP7.33□□□□□ -1.24
SYNE3-205ENST00000557275 PDE6GP18545 87 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 HERVK_113P63121 156 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 ZNF497Q6ZNH5 498 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 TMEM158Q8WZ71 300 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 C1orf159Q96HA4 380 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 FGF16O43320 207 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 WNT2P09544 360 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 MINOS1Q5TGZ0 78 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 MRPS18CQ9Y3D5 142 aaKnown RBP7.33□□□□□ -1.24
SYNE3-205ENST00000557275 MINOS1-NBL1R4GNA1 71 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 I3L3M4 83 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 Q0VG73 95 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 IL15RAQ13261 267 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 SAA2-SAA4A0A096LPE2 208 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 TEX48A0A1B0GUV7 120 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 SAA2P0DJI9 122 aaPredicted RBP7.33□□□□□ -1.24
SYNE3-205ENST00000557275 CD33P20138 364 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 NDUFS5O43920 106 aa7.33□□□□□ -1.24
SYNE3-205ENST00000557275 RNF166Q96A37 237 aaPredicted RBP7.33□□□□□ -1.24
SYNE3-205ENST00000557275 C9JQL5 133 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 LINC01551Q86U37 167 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 ZPLD1Q8TCW7 415 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 ZNF826PQ6ZT77 177 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 FAM60AQ9NP50 221 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 LSM4Q9Y4Z0 139 aaKnown RBP7.32□□□□□ -1.24
SYNE3-205ENST00000557275 RNF114Q9Y508 228 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 PLXNA3P51805 1871 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 NPIPB5A8MRT5 1133 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 A8MWP6 167 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 CISD3P0C7P0 127 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 HCSTQ9UBK5 93 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 A0A0A6YYD4 124 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.32□□□□□ -1.24
SYNE3-205ENST00000557275 FOXL2P58012 376 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 TRGV1A0A0A0MS02 117 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 C1orf53Q5VUE5 145 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 TMEM75Q8N9X5 138 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 WFDC9Q8NEX5 89 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 NUP35Q8NFH5 326 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 FGF6P10767 208 aa7.32□□□□□ -1.24
SYNE3-205ENST00000557275 PRR15LQ9BU68 103 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms