RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 I3L2K1 104 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 IGKV1-17P01599 117 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 IGLL1P15814 213 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 PLP1P60201 277 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 GOLT1AQ6ZVE7 132 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 C8orf46Q8TAG6 207 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 SLC25A39Q9BZJ4 359 aaPredicted RBP5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 ZNF492Q9P255 531 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 HIGD1AQ9Y241 93 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 GOLT1BQ9Y3E0 138 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 INSIG2Q9Y5U4 225 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 S4R3C0 116 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 SIAH2O43255 324 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 LY6HO94772 140 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 APOHP02749 345 aaPredicted RBP5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 GRNP28799 593 aaKnown RBP5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 ZNF138P52744 262 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 PRNTQ86SH4 94 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 BCL6BQ8N143 479 aaPredicted RBP5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 CHRDL1Q9BU40 450 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 RALYQ9UKM9 306 aaKnown RBP5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 LAMTOR2Q9Y2Q5 125 aa5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 TPRP12270 2363 aaKnown RBP5.49□□□□□ -1.53
LINC-ROR-201ENST00000553704 NPIPB6E9PJ23 425 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 RBP4P02753 201 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 HOXB4P17483 251 aaPredicted RBP5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 TSPOP30536 169 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 PAX2Q02962 417 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 CT83Q5H943 113 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 COL5A1-AS1Q5SY13 56 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 SMIM12Q96EX1 92 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 ZC2HC1AQ96GY0 325 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 A8MWL6 223 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 K7EIM0 57 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 HINT1P49773 126 aaPredicted RBP5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 GAGE1Q13065 139 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 KLF17Q5JT82 389 aaPredicted RBP5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 RBPMS2Q6ZRY4 209 aaKnown RBP5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 LINC01560Q8TB33 94 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 MCRIP2Q9BUT9 160 aaKnown RBP5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 OTORQ9NRC9 128 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 MUC6Q6W4X9 2439 aa5.48□□□□□ -1.53
LINC-ROR-201ENST00000553704 TRAV9-2A0A087WT02 112 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 LOC102724200A0A096LPH7 203 aaPredicted RBP5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 PPIAL4CA0A0B4J2A2 164 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 LY6LH3BQJ8 138 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 TIMM23O14925 209 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 PPIAL4GP0DN37 164 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 COL8A1P27658 744 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 KLRD1Q13241 179 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 PLGLAQ15195 96 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 OR4F17Q8NGA8 305 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 TNFRSF14Q92956 283 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 RPEQ96AT9 228 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 RASL11BQ9BPW5 248 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 ANKHD1Q8IWZ3 2542 aaKnown RBP5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 hDV102S1A0JD36 115 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 M0R3E3 92 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 ARMS2P0C7Q2 107 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 APOBEC3AP31941 199 aaPredicted RBP5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 RBPJQ06330 500 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 UNQ5815/PRO19632Q6UWF5 114 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 TMEM14CQ9P0S9 112 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 ONECUT1Q9UBC0 465 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 ZFP30Q9Y2G7 519 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 ZFHX3Q15911 3703 aa5.47□□□□□ -1.53
LINC-ROR-201ENST00000553704 TRBV19A0A075B6N1 114 aa5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 H3BRN7 92 aa5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 CD3EP07766 207 aa5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 RELQ04864 619 aaPredicted RBP5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 SIGLEC15Q6ZMC9 328 aa5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 DAZAP1Q96EP5 407 aaKnown RBP5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 SHANK2-AS3Q9BTD1 123 aa5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 TMEM70Q9BUB7 260 aa5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 GFRA4Q9GZZ7 299 aa5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 NGBQ9NPG2 151 aa5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 HILPDAQ9Y5L2 63 aa5.46□□□□□ -1.53
LINC-ROR-201ENST00000553704 ASH1LQ9NR48 2969 aaKnown RBP5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 A0A1W2PRD5 423 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 A0A1W2PRF3 423 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 A0A1W2PRM7 423 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 OR4C46A6NHA9 309 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 FAM90A27PA6NNH2 459 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 CHEK1O14757 476 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 MRPS12O15235 138 aaKnown RBP5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 HLA-DRB1P01911 266 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 CSN3P07498 182 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 CRIP1P50238 77 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 CDSNQ15517 529 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 DMRTA1Q5VZB9 504 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 KLHDC1Q8N7A1 406 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 CFHR4Q92496 578 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 SOX21Q9Y651 276 aaPredicted RBP5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 ABCA4P78363 2273 aa5.46□□□□□ -1.54
LINC-ROR-201ENST00000553704 SYS1-DBNDD2H3BUS1 97 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 CNIH1O95406 144 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 IL4P05112 153 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 ZNF672Q499Z4 452 aaPredicted RBP5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 MUC15Q8N387 334 aa5.45□□□□□ -1.54
LINC-ROR-201ENST00000553704 ZNF491Q8N8L2 437 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms