RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 FRMD6-AS1P0C7T7 363 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 HOXB4P17483 251 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-205ENST00000553474 SRIP30626 198 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 C5orf64Q2M2E5 130 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 CYB5R2Q6BCY4 276 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 C19orf35Q6ZS72 473 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 FAM168AQ92567 244 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 C20orf144Q9BQM9 153 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 SHANK2-AS3Q9BTD1 123 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 POLR3KQ9Y2Y1 108 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-205ENST00000553474 ABCA4P78363 2273 aa10.23□□□□□ -0.77
SHMT2-205ENST00000553474 C19orf71A6NCJ1 209 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 K7EQM0 130 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 SPINK4O60575 86 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 ZNF324O75467 553 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-205ENST00000553474 P01737 135 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 DLX1P56177 255 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 ARF6P62330 175 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 GNG5P63218 68 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 SLC35B1P78383 322 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 KLF5Q13887 457 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-205ENST00000553474 ZNF562Q6V9R5 426 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 OR4F17Q8NGA8 305 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 IGFBPL1Q8WX77 278 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 DAZAP1Q96EP5 407 aaKnown RBP10.22□□□□□ -0.77
SHMT2-205ENST00000553474 TBX15Q96SF7 602 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 NEU1Q99519 415 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 THYN1Q9P016 225 aa10.22□□□□□ -0.77
SHMT2-205ENST00000553474 A0A1B0GXF2 115 aa10.21□□□□□ -0.77
SHMT2-205ENST00000553474 ZNF705FA8MVS1 300 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-205ENST00000553474 NPIPB6E9PJ23 425 aa10.21□□□□□ -0.77
SHMT2-205ENST00000553474 H3BRN7 92 aa10.21□□□□□ -0.77
SHMT2-205ENST00000553474 ZNF705DP0CH99 300 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-205ENST00000553474 ZNF705BP0CI00 300 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-205ENST00000553474 APELAP0DMC3 54 aa10.21□□□□□ -0.77
SHMT2-205ENST00000553474 S100A7P31151 101 aa10.21□□□□□ -0.77
SHMT2-205ENST00000553474 PDE6HQ13956 83 aa10.21□□□□□ -0.77
SHMT2-205ENST00000553474 EBI3Q14213 229 aa10.21□□□□□ -0.77
SHMT2-205ENST00000553474 PRR27Q6MZM9 219 aa10.21□□□□□ -0.77
SHMT2-205ENST00000553474 ZFP30Q9Y2G7 519 aa10.21□□□□□ -0.77
SHMT2-205ENST00000553474 A0A1W2PS18 150 aa10.21□□□□□ -0.78
SHMT2-205ENST00000553474 CA1P00915 261 aaPredicted RBP10.21□□□□□ -0.78
SHMT2-205ENST00000553474 HBBP68871 147 aa10.21□□□□□ -0.78
SHMT2-205ENST00000553474 SLAQ13239 276 aa10.21□□□□□ -0.78
SHMT2-205ENST00000553474 LDLRAD2Q5SZI1 272 aa10.21□□□□□ -0.78
SHMT2-205ENST00000553474 TOMM20LQ6UXN7 152 aa10.21□□□□□ -0.78
SHMT2-205ENST00000553474 TMEM75Q8N9X5 138 aa10.21□□□□□ -0.78
SHMT2-205ENST00000553474 PTPN13Q12923 2485 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 TRBV19A0A075B6N1 114 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 SERTM2A0A1B0GWG4 89 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 WI2-2373I1.2A0A1W2PRP0 233 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 RAB4AP20338 218 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 AMTP48728 403 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 RBPMS2Q6ZRY4 209 aaKnown RBP10.2□□□□□ -0.78
SHMT2-205ENST00000553474 Q86TA4 180 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 TTC9CQ8N5M4 171 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 ZNF491Q8N8L2 437 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 C18orf32Q8TCD1 76 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 RNF125Q96EQ8 232 aa10.2□□□□□ -0.78
SHMT2-205ENST00000553474 TBL2Q9Y4P3 447 aaKnown RBP10.2□□□□□ -0.78
SHMT2-205ENST00000553474 IGLV11-55A0A075B6I3 123 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 IGHV3-21A0A0B4J1V1 117 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 IGLC2P0DOY2 106 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 COL8A1P27658 744 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 MFAP4P55083 255 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 FOXA3P55318 350 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-205ENST00000553474 NRN1Q9NPD7 142 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 HILPDAQ9Y5L2 63 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 FBLL1A6NHQ2 334 aaKnown RBP10.19□□□□□ -0.78
SHMT2-205ENST00000553474 F2Z2F3 143 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 GNG7O60262 68 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 KIAA1644Q3SXP7 199 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 LEMD1Q68G75 181 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 Q8N6K4 173 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 ARPC1AQ92747 370 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 TXN2Q99757 166 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 VAMP8Q9BV40 100 aa10.19□□□□□ -0.78
SHMT2-205ENST00000553474 GSX1Q9H4S2 264 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-205ENST00000553474 ABCA1O95477 2261 aa10.18□□□□□ -0.78
SHMT2-205ENST00000553474 M0QZK8 103 aa10.18□□□□□ -0.78
SHMT2-205ENST00000553474 COX6B1P14854 86 aa10.18□□□□□ -0.78
SHMT2-205ENST00000553474 FCGR2BP31994 310 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-205ENST00000553474 PRB3Q04118 309 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-205ENST00000553474 HES1Q14469 280 aa10.18□□□□□ -0.78
SHMT2-205ENST00000553474 CLEC2AQ6UVW9 174 aa10.18□□□□□ -0.78
SHMT2-205ENST00000553474 VMO1Q7Z5L0 202 aa10.18□□□□□ -0.78
SHMT2-205ENST00000553474 RCHY1Q96PM5 261 aa10.18□□□□□ -0.78
SHMT2-205ENST00000553474 ALKBH7Q9BT30 221 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-205ENST00000553474 C1RLQ9NZP8 487 aa10.18□□□□□ -0.78
SHMT2-205ENST00000553474 RPH3ALQ9UNE2 315 aa10.18□□□□□ -0.78
SHMT2-205ENST00000553474 A0A1B0GW15 77 aa10.17□□□□□ -0.78
SHMT2-205ENST00000553474 IGLV2-11P01706 119 aa10.17□□□□□ -0.78
SHMT2-205ENST00000553474 IL4P05112 153 aa10.17□□□□□ -0.78
SHMT2-205ENST00000553474 Q6AWC8 147 aa10.17□□□□□ -0.78
SHMT2-205ENST00000553474 SIGLEC15Q6ZMC9 328 aa10.17□□□□□ -0.78
SHMT2-205ENST00000553474 LHFPL4Q7Z7J7 247 aa10.17□□□□□ -0.78
SHMT2-205ENST00000553474 BORCS7Q96B45 105 aa10.17□□□□□ -0.78
SHMT2-205ENST00000553474 MIEN1Q9BRT3 115 aa10.17□□□□□ -0.78
SHMT2-205ENST00000553474 HRNRQ86YZ3 2850 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms