RNA–Protein interactions for RNA: ENST00000550884.2

AC087888.1-201, humanhuman

BASIC

Gene AC087888.1, Length 1,254 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087888.1-201ENST00000550884 HIST1H2BDP58876 126 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 HIST1H2BCP62807 126 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 SURF2Q15527 256 aaPredicted RBP3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 HIST2H2BEQ16778 126 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 SAMD13Q5VXD3 122 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 Q6P435 159 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 EXOC3-AS1Q8N2X6 119 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 MUC7Q8TAX7 377 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 C1orf54Q8WWF1 131 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 HIST1H2BHQ93079 126 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 MAGOHBQ96A72 148 aaKnown RBP3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 PLEKHB2Q96CS7 222 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 RMND5BQ96G75 393 aaPredicted RBP3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 CAPZA3Q96KX2 299 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 HIST1H2BNQ99877 126 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 HIST1H2BMQ99879 126 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 TP73-AS1Q9UF72 201 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 FUT9Q9Y231 359 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 USP34Q70CQ2 3546 aa3.16□□□□□ -1.9
AC087888.1-201ENST00000550884 LOC285095A0A1B0GVY8 99 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 GRIFINA4D1Z8 144 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 C10orf142B7Z368 130 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 E7EQ34 232 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 J3QRK9 145 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 KPNA4O00629 521 aaPredicted RBP3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 ARPC5O15511 151 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 PRM2P04554 102 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 KLF3P57682 345 aaPredicted RBP3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 TAS2R30P59541 319 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 DHRS2Q13268 280 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 SCGB2B2Q4G0G5 96 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 KPRPQ5T749 579 aaPredicted RBP3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 ZFAND6Q6FIF0 208 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 RPL22L1Q6P5R6 122 aaKnown RBP3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF322Q6U7Q0 402 aaPredicted RBP3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 C11orf40Q8WZ69 217 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 H1FXQ92522 213 aaKnown RBP3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 SMDT1Q9H4I9 107 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 XAGE1AQ9HD64 81 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 SPANXA1Q9NS26 97 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 IL36BQ9NZH7 164 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF835Q9Y2P0 537 aa3.15□□□□□ -1.91
AC087888.1-201ENST00000550884 ZFHX2Q9C0A1 2572 aaPredicted RBP3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 DMDP11532 3685 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 C19orf71A6NCJ1 209 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 OR2J2O76002 312 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 IGHV1-69P01742 117 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 PPBPP02775 128 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 CSN2P05814 226 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 PIRTP0C851 137 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 RPL22P35268 128 aaKnown RBP3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 SPINT3P49223 89 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 PIGPP57054 158 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 RBX1P62877 108 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 WHAMMP3Q1A5X7 153 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 LGALSLQ3ZCW2 172 aaPredicted RBP3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 AADACL3Q5VUY0 350 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 CNEP1R1Q8N9A8 125 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 OR10D4PQ8NGN7 298 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 EFCAB11Q9BUY7 163 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 RSPO3Q9BXY4 272 aaPredicted RBP3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 IMUPQ9GZP8 106 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 RNF122Q9H9V4 155 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 MCTS1Q9ULC4 181 aaKnown RBP3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 AMMECR1Q9Y4X0 333 aaPredicted RBP3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 CCDC88CQ9P219 2028 aa3.14□□□□□ -1.91
AC087888.1-201ENST00000550884 SPTBN4Q9H254 2564 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF292O60281 2723 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 IGHV3-73A0A0B4J1V6 119 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 TRAV38-1A0A0B4J264 116 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 TRAV41A0A0B4J266 112 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 SPTY2D1-AS1A0A0U1RR47 76 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 RIIAD1A6NNX1 92 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 SOD1P00441 154 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 APOA2P02652 100 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 FXYD7P58549 80 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 CLDND2Q8NHS1 167 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF675Q8TD23 568 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 DERL1Q9BUN8 251 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 C16orf95Q9H693 158 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 LAMA1P25391 3075 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 SPTBP11277 2137 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 MYO15AQ9UKN7 3530 aa3.13□□□□□ -1.91
AC087888.1-201ENST00000550884 SPTBN2O15020 2390 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 LEPROTO15243 131 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 BANF1O75531 89 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 TNFP01375 233 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 GZMHP20718 246 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 LPAR6P43657 344 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 FOXA1P55317 472 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 RPS11P62280 158 aaKnown RBP eCLIP3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 BIKQ13323 160 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 LTC4SQ16873 150 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 LYRM7Q5U5X0 104 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 ZNF660Q6AZW8 331 aaPredicted RBP3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 SPINT4Q6UDR6 99 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 GKN2Q86XP6 184 aa3.12□□□□□ -1.91
AC087888.1-201ENST00000550884 ST6GALNAC3Q8NDV1 305 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms