RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 GAGE12FP0CL80 117 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 GAGE12GP0CL81 117 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 GAGE12IP0CL82 117 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 COTL1Q14019 142 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 PEX7O00628 323 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 Q6YL49 198 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 C4orf3Q8WVX3 66 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 CFHR4Q92496 578 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 RNF183Q96D59 192 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 TRGV9Q99603 122 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 SCRT1Q9BWW7 348 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 SMDT1Q9H4I9 107 aa6.9□□□□□ -1.3
FNDC3A-206ENST00000541916 ZNF98A6NK75 572 aa6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 PMS2P5A8MQ11 134 aa6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 NPIPB5A8MRT5 1133 aa6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 PSMB2P49721 201 aa6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 LINC00205P59089 165 aa6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 MRAP2Q96G30 205 aa6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 MRPL18Q9H0U6 180 aaKnown RBP6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 IFT22Q9H7X7 185 aa6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 SOX21Q9Y651 276 aaPredicted RBP6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 PTPN13Q12923 2485 aa6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 TNFRSF13BO14836 293 aaPredicted RBP6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 ZNF524Q96C55 264 aa6.9□□□□□ -1.31
FNDC3A-206ENST00000541916 IGKV1D-8A0A087WSZ0 117 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 IGLL1P15814 213 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 SPINK13Q1W4C9 94 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 PARLQ9H300 379 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 TMEM131Q92545 1883 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 IGKV2-40A0A087WW87 121 aaPredicted RBP6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 F8W735 103 aaPredicted RBP6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 MMP23AO75900 390 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 IGKV2D-40P01614 121 aaPredicted RBP6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 DIAPH2-AS1Q14236 149 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 CENPWQ5EE01 88 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 HAPLN4Q86UW8 402 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 GGTLC1Q9BX51 225 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 A0A1W2PPI3 338 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 FER1L6-AS1Q8NA97 138 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 SFRP2Q96HF1 295 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 EVI2AP22794 236 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 LMO4P61968 165 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 C5orf24Q7Z6I8 188 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 TMEM14BQ9NUH8 114 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 IGHV7-4-1A0A0J9YVY3 117 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 TRGC2P03986 189 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 BTCP35070 178 aa6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 CIRBPQ14011 172 aaKnown RBP6.89□□□□□ -1.31
FNDC3A-206ENST00000541916 SNRNP200O75643 2136 aaKnown RBP6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 PYYP10082 97 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 IGFL4Q6B9Z1 124 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 SCO2A0A1W2PP80 73 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 IGLV2-23P01705 113 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 PSMG3Q9BT73 122 aaPredicted RBP6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 SPART-AS1P0CW21 52 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 ZNF138P52744 262 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 GNG5P63218 68 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 PSG3Q16557 428 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 IGLL5B9A064 214 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 NMUP48645 174 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 RNF138Q8WVD3 245 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 DLX4Q92988 240 aaPredicted RBP6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 SPAG8Q99932 426 aaPredicted RBP6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 FAM90A2PQ658T7 463 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 SIRPDQ9H106 197 aa6.88□□□□□ -1.31
FNDC3A-206ENST00000541916 H3BRM9 83 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 HILS1P60008 231 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 PKIAP61925 76 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 TREML4Q6UXN2 200 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 OR13C6PQ8NH95 151 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 PSG8Q9UQ74 426 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 AZU1P20160 251 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 SRSF9Q13242 221 aaKnown RBP eCLIP6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 PUSL1Q8N0Z8 303 aaKnown RBP6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 SPATA25Q9BR10 227 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 ST20Q9HBF5 79 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 IGHV4OR15-8A0A075B7B6 117 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 A0A087WW49 117 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 DIRC3C9JPN6 131 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 RNASE1P07998 156 aaKnown RBP6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 SPATA31B1PQ5VZV4 182 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 CACNG7P62955 275 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 IFITM2Q01629 132 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 OR4D5Q8NGN0 318 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 ZNF581Q9P0T4 197 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 ZFP30Q9Y2G7 519 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 TMEM50AO95807 157 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 ATP5G3P48201 142 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 CSTL1Q9H114 145 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 PAM16Q9Y3D7 125 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 CACNA1AO00555 2505 aa6.87□□□□□ -1.31
FNDC3A-206ENST00000541916 C5orf52A6NGY3 159 aa6.86□□□□□ -1.31
FNDC3A-206ENST00000541916 IFITM10A6NMD0 228 aa6.86□□□□□ -1.31
FNDC3A-206ENST00000541916 LHBP01229 141 aa6.86□□□□□ -1.31
FNDC3A-206ENST00000541916 WIPF2Q8TF74 440 aaPredicted RBP6.86□□□□□ -1.31
FNDC3A-206ENST00000541916 IGF2BP2-AS1Q96M15 143 aa6.86□□□□□ -1.31
FNDC3A-206ENST00000541916 H3BVH4 76 aa6.86□□□□□ -1.31
FNDC3A-206ENST00000541916 KIAA1644Q3SXP7 199 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms