RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 MAPK1IP1LQ8NDC0 245 aa12.13□□□□□ -0.47
CLPTM1-202ENST00000541297 CENPVL3A0A0U1RRI6 287 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 MOSP00540 346 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 IGLV2-8P01709 118 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 RNASE2P10153 161 aaKnown RBP12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 ERHP84090 104 aaKnown RBP12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 PAX8Q06710 450 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 IBA57Q5T440 356 aaKnown RBP12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 MINOS1Q5TGZ0 78 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 RUSC1-AS1Q66K80 236 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 TMEM167BQ9NRX6 74 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 MINOS1-NBL1R4GNA1 71 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 GCN1Q92616 2671 aaKnown RBP12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 GGTLC3B5MD39 225 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 OR7C2O60412 319 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 MLANAQ16655 118 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 CCDC144NLQ6NUI1 221 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 C19orf35Q6ZS72 473 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 Q6ZVH6 145 aa12.12□□□□□ -0.47
CLPTM1-202ENST00000541297 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.12□□□□□ -0.476e-8■■■■□ 21.3
CLPTM1-202ENST00000541297 A0A1W2PN81 502 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 ISLRO14498 428 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 HLA-DQA1P01909 254 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 APCSP02743 223 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 RBX1P62877 108 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 LCN12Q6JVE5 192 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 NHLRC2Q8NBF2 726 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 AJUBAQ96IF1 538 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 ZNF469Q96JG9 3925 aaPredicted RBP12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 SMIM27A0A1W2PRY6 76 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 C20orf202A1L168 122 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 CCL25O15444 150 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 NBR2O15453 112 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 RPL27AP46776 148 aaKnown RBP12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 DSCR9P59020 149 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 BORCS7Q96B45 105 aa12.11□□□□□ -0.47
CLPTM1-202ENST00000541297 IGKV1OR2-108A0A075B7D4 117 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 TRAV40A0A0B4J280 105 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 NPFFO15130 113 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 MSMBP08118 114 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 SSBP2P81877 361 aaPredicted RBP12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 SLAQ13239 276 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 COX19Q49B96 90 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 C2orf83Q53S99 150 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 FAM120AOSQ5T036 256 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 BRD3OSQ6XYD6 125 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 TECRQ9NZ01 308 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 ARL2-SNX15V9GYD0 113 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 NCBP2LA6PVI3 153 aaKnown RBP12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 HINT1P49773 126 aaPredicted RBP12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 RNF5Q99942 180 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 IGHV3-48P01763 117 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 C18orf32Q8TCD1 76 aa12.1□□□□□ -0.47
CLPTM1-202ENST00000541297 IGLC7A0M8Q6 106 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 CNIH1O95406 144 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 TSPOP30536 169 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 PTTG1IPP53801 180 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 KLHDC1Q8N7A1 406 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 IGF2BP2-AS1Q96M15 143 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 LINC00479Q96M42 142 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 HIF1ANQ9NWT6 349 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 IZUMO1RA6ND01 250 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 SLC25A16P16260 332 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 S100A7P31151 101 aa12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 SRSF12Q8WXF0 261 aaKnown RBP12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 ZNF331Q9NQX6 463 aaPredicted RBP12.09□□□□□ -0.47
CLPTM1-202ENST00000541297 IGHV4-38-2P0DP08 117 aa12.08□□□□□ -0.48
CLPTM1-202ENST00000541297 TMEM11P17152 192 aa12.08□□□□□ -0.48
CLPTM1-202ENST00000541297 UNQ5815/PRO19632Q6UWF5 114 aa12.08□□□□□ -0.48
CLPTM1-202ENST00000541297 ORAOV1Q8WV07 137 aa12.08□□□□□ -0.48
CLPTM1-202ENST00000541297 DEFB113Q30KQ7 82 aa12.08□□□□□ -0.48
CLPTM1-202ENST00000541297 B4DSR2 109 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 INS-IGF2F8WCM5 200 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 NDUFA3O95167 84 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 NPBQ8NG41 125 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 SOX21Q9Y651 276 aaPredicted RBP12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 TEX22C9J3V5 150 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 C5orf64Q2M2E5 130 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 OR2T6Q8NHC8 308 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 PSMG3-AS1Q96PY0 264 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 CR1P17927 2039 aa12.07□□□□□ -0.48
CLPTM1-202ENST00000541297 CSPG4Q6UVK1 2322 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 IGHV1-69DA0A0B4J2H0 117 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 IGHV1-69P01742 117 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 CD69Q07108 199 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 GDF5OSQ5U4N7 250 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 FNDC4Q9H6D8 234 aaPredicted RBP12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 A0A096LNT2 108 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 TRAV5A0A0B4J249 113 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 A0A1W2PRE2 83 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 PRSS47A8MTI9 375 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 SUB1P53999 127 aaKnown RBP eCLIP12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 MFAP2P55001 183 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 Q56UQ5 140 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 Q5PR19 223 aa12.06□□□□□ -0.48
CLPTM1-202ENST00000541297 MORN5Q5VZ52 161 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms