RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TRAV8-2A0A0B4J237 113 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 F6UB75 175 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 DEFB4AO15263 64 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 SPP1P10451 314 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 HLA-DRB4P13762 266 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 GALR1P47211 349 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 PSMB3P49720 205 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 SULT1A1P50225 295 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 RAP2BP61225 183 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 VWC2Q2TAL6 325 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 ARV1Q9H2C2 271 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 HLA-DRB4X5D2U9 266 aa9.58□□□□□ -0.88
PRKDC-206ENST00000536429 UBE2L5PA0A1B0GUS4 154 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 ISLRO14498 428 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 PRB4P10163 310 aaPredicted RBP9.57□□□□□ -0.88
PRKDC-206ENST00000536429 ID1P41134 155 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 NHLH2Q02577 135 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 PMS2P11Q13670 270 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 MORN5Q5VZ52 161 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 MIC13Q5XKP0 118 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 MORN3Q6PF18 240 aaPredicted RBP9.57□□□□□ -0.88
PRKDC-206ENST00000536429 ZNF546Q86UE3 836 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 CSNK1G2-AS1Q8NCQ2 148 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 TMEM37Q8WXS4 190 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 C16orf92Q96LL3 132 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 NMES1Q9C002 83 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 SAV1Q9H4B6 383 aaPredicted RBP9.57□□□□□ -0.88
PRKDC-206ENST00000536429 UQCC1Q9NVA1 299 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 WDR83OSQ9Y284 106 aa9.57□□□□□ -0.88
PRKDC-206ENST00000536429 MRPS12O15235 138 aaKnown RBP9.56□□□□□ -0.88
PRKDC-206ENST00000536429 SSNA1O43805 119 aa9.56□□□□□ -0.88
PRKDC-206ENST00000536429 SNRPCP09234 159 aaKnown RBP9.56□□□□□ -0.88
PRKDC-206ENST00000536429 CAMLGP49069 296 aa9.56□□□□□ -0.88
PRKDC-206ENST00000536429 FXYD7P58549 80 aa9.56□□□□□ -0.88
PRKDC-206ENST00000536429 FOXI2Q6ZQN5 318 aa9.56□□□□□ -0.88
PRKDC-206ENST00000536429 STX12Q86Y82 276 aa9.56□□□□□ -0.88
PRKDC-206ENST00000536429 RNF182Q8N6D2 247 aa9.56□□□□□ -0.88
PRKDC-206ENST00000536429 XCL2Q9UBD3 114 aa9.56□□□□□ -0.88
PRKDC-206ENST00000536429 HLA-DMBP28068 263 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 S100A11P31949 105 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 PRR20EP86478 221 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 PRR20CP86479 221 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 PRR20DP86480 221 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 PRR20BP86481 221 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 PRR20AP86496 221 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 FGL1Q08830 312 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 LINC00305Q7Z4B0 112 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 Q8NAQ8 132 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 PPP1R1CQ8WVI7 109 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 GPR82Q96P67 336 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 RNF126Q9BV68 326 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 ALG5Q9Y673 324 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 X6R8D5 127 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 KMT2AQ03164 3969 aa9.55□□□□□ -0.88
PRKDC-206ENST00000536429 A0A0J9YX75 114 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 CXorf65A6NEN9 183 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 ZNF705EA8MWA4 302 aaPredicted RBP9.54□□□□□ -0.88
PRKDC-206ENST00000536429 E5RGE8 158 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 COX7A2P2O60397 106 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 RBMY1A1P0DJD3 496 aaKnown RBP9.54□□□□□ -0.88
PRKDC-206ENST00000536429 RBMY1CP0DJD4 496 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 RPL7P18124 248 aaKnown RBP9.54□□□□□ -0.88
PRKDC-206ENST00000536429 ATF4P18848 351 aaPredicted RBP9.54□□□□□ -0.88
PRKDC-206ENST00000536429 FGF7P21781 194 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 MEOX2P50222 304 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 HBG1P69891 147 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 HBG2P69892 147 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 BAXQ07812 192 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 OPCMLQ14982 345 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 RBMY1FQ15415 496 aaKnown RBP9.54□□□□□ -0.88
PRKDC-206ENST00000536429 FAM78BQ5VT40 261 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 ZNF709Q8N972 641 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 OR4B1Q8NGF8 309 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 SLC35B3Q9H1N7 401 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 C11orf68Q9H3H3 251 aaKnown RBP9.54□□□□□ -0.88
PRKDC-206ENST00000536429 VPS13DQ5THJ4 4388 aa9.54□□□□□ -0.88
PRKDC-206ENST00000536429 A0A087X0K7 114 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 TRAV5A0A0B4J249 113 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 IGHV4-28A0A0C4DH34 117 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 H3BTX0 84 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 RLN2P04090 185 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 ZNF705DP0CH99 300 aaPredicted RBP9.53□□□□□ -0.88
PRKDC-206ENST00000536429 ZNF705BP0CI00 300 aaPredicted RBP9.53□□□□□ -0.88
PRKDC-206ENST00000536429 CXCL3P19876 107 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 S100A7P31151 101 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 NANOS2P60321 138 aaKnown RBP9.53□□□□□ -0.88
PRKDC-206ENST00000536429 CYCSP99999 105 aaKnown RBP9.53□□□□□ -0.88
PRKDC-206ENST00000536429 CLINT1Q14677 625 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 TMEM41BQ5BJD5 291 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 PXDC1Q5TGL8 231 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 C10orf113Q5VZT2 155 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 OR5C1Q8NGR4 320 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 THAP6Q8TBB0 222 aa9.53□□□□□ -0.88
PRKDC-206ENST00000536429 LCE6AA0A183 80 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 MPC2O95563 127 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 PTTG1O95997 202 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 RPL29P47914 159 aaKnown RBP9.52□□□□□ -0.89
PRKDC-206ENST00000536429 B2MP61769 119 aa9.52□□□□□ -0.89
PRKDC-206ENST00000536429 RAB31Q13636 194 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms