RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 DEFB1P60022 68 aa9.62□□□□□ -0.87
CAPN1-228ENST00000534373 IAH1Q2TAA2 248 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-228ENST00000534373 C17orf77Q96MU5 243 aa9.62□□□□□ -0.87
CAPN1-228ENST00000534373 SHANK2-AS3Q9BTD1 123 aa9.62□□□□□ -0.87
CAPN1-228ENST00000534373 GGACTQ9BVM4 153 aa9.62□□□□□ -0.87
CAPN1-228ENST00000534373 SLC25A39Q9BZJ4 359 aaPredicted RBP9.62□□□□□ -0.87
CAPN1-228ENST00000534373 DOK5Q9P104 306 aa9.62□□□□□ -0.87
CAPN1-228ENST00000534373 CELA1Q9UNI1 258 aa9.62□□□□□ -0.87
CAPN1-228ENST00000534373 GOLT1BQ9Y3E0 138 aa9.62□□□□□ -0.87
CAPN1-228ENST00000534373 RFNGQ9Y644 331 aa9.62□□□□□ -0.87
CAPN1-228ENST00000534373 SMCO3A2RU48 225 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 H3BRN7 92 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 DUSP14O95147 198 aaKnown RBP9.61□□□□□ -0.87
CAPN1-228ENST00000534373 AMBPP02760 352 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 PXDC1Q5TGL8 231 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 TEPPQ6URK8 271 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 ZBTB8BQ8NAP8 495 aaPredicted RBP9.61□□□□□ -0.87
CAPN1-228ENST00000534373 S100ZQ8WXG8 99 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 SLC35B3Q9H1N7 401 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 HIGD1AQ9Y241 93 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 VPS13DQ5THJ4 4388 aa9.61□□□□□ -0.87
CAPN1-228ENST00000534373 F6UB75 175 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 PLA2G10O15496 165 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 LYRM1O43325 122 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 METTL15P1P0C7V9 234 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 LINC00869P0C866 280 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 FXYD7P58549 80 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 PRR20EP86478 221 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 PRR20CP86479 221 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 PRR20DP86480 221 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 PRR20BP86481 221 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 PRR20AP86496 221 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 FAM210BQ96KR6 192 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 C20orf173Q96LM9 149 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 CCDC32Q9BV29 185 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 GSKIPQ9P0R6 139 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 MGAT4CQ9UBM8 478 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 FRAS1Q86XX4 4008 aa9.6□□□□□ -0.87
CAPN1-228ENST00000534373 IGHV3OR16-12A0A075B7B8 117 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 SCGB1D2O95969 90 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 HBE1P02100 147 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 TCRBP04435 133 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 B2MP61769 119 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 RRAS2P62070 204 aaPredicted RBP9.59□□□□□ -0.87
CAPN1-228ENST00000534373 OXA1LQ15070 435 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 AMTNQ6UX39 209 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 LINC00299Q6ZSB3 139 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 C1orf158Q8N1D5 194 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 IGF2BP2-AS1Q96M15 143 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 NDUFAF3Q9BU61 184 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 SCRT1Q9BWW7 348 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 C20orf85Q9H1P6 137 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 DKK2Q9UBU2 259 aa9.59□□□□□ -0.87
CAPN1-228ENST00000534373 A0A087X0K7 114 aa9.58□□□□□ -0.88
CAPN1-228ENST00000534373 TRAV8-2A0A0B4J237 113 aa9.58□□□□□ -0.88
CAPN1-228ENST00000534373 C7orf66A4D0T2 115 aa9.58□□□□□ -0.88
CAPN1-228ENST00000534373 MBPP02686 304 aaPredicted RBP9.58□□□□□ -0.88
CAPN1-228ENST00000534373 OR5G3P0C626 314 aa9.58□□□□□ -0.88
CAPN1-228ENST00000534373 ZNF846Q147U1 533 aa9.58□□□□□ -0.88
CAPN1-228ENST00000534373 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
CAPN1-228ENST00000534373 NIPSNAP3BQ9BS92 247 aa9.58□□□□□ -0.88
CAPN1-228ENST00000534373 RCL1Q9Y2P8 373 aaKnown RBP9.58□□□□□ -0.88
CAPN1-228ENST00000534373 GOSR2O14653 212 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 CCNKO75909 580 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 P0DMU3 169 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 FAM231AP0DMU4 169 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 FAM231CP0DMU5 169 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 CNN1P51911 297 aaKnown RBP9.57□□□□□ -0.88
CAPN1-228ENST00000534373 EMP1P54849 157 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 FGL1Q08830 312 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 ZNF767PQ75MW2 155 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 ZNF546Q86UE3 836 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 ZNF431Q8TF32 576 aaPredicted RBP9.57□□□□□ -0.88
CAPN1-228ENST00000534373 ARL6Q9H0F7 186 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 ARV1Q9H2C2 271 aa9.57□□□□□ -0.88
CAPN1-228ENST00000534373 DNAH10Q8IVF4 4471 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 LOC102723971A0A1B0GUV8 181 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 L7N2F9 121 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 AGPAT2O15120 278 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 CXCL2P19875 107 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 VAMP2P63027 116 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 RAB31Q13636 194 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 FAM222AQ5U5X8 452 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 GSG1LQ6UXU4 331 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 PATE2Q6UY27 113 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 OR11H7Q8NGC8 314 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 LRRC20Q8TCA0 184 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 UHRF2Q96PU4 802 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 TMEM208Q9BTX3 173 aa9.56□□□□□ -0.88
CAPN1-228ENST00000534373 CXCL3P19876 107 aa9.55□□□□□ -0.88
CAPN1-228ENST00000534373 SLC38A11Q08AI6 406 aa9.55□□□□□ -0.88
CAPN1-228ENST00000534373 ARL16Q0P5N6 197 aa9.55□□□□□ -0.88
CAPN1-228ENST00000534373 PSG3Q16557 428 aa9.55□□□□□ -0.88
CAPN1-228ENST00000534373 RNF182Q8N6D2 247 aa9.55□□□□□ -0.88
CAPN1-228ENST00000534373 POM121L12Q8N7R1 296 aa9.55□□□□□ -0.88
CAPN1-228ENST00000534373 ZNF738Q8NE65 137 aa9.55□□□□□ -0.88
CAPN1-228ENST00000534373 C2orf50Q96LR7 162 aa9.55□□□□□ -0.88
CAPN1-228ENST00000534373 NUDT15Q9NV35 164 aa9.55□□□□□ -0.88
CAPN1-228ENST00000534373 YTHDF2Q9Y5A9 579 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms