RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 RHPN1-AS1Q9BWJ2 59 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 SONP18583 2426 aaKnown RBP12.04□□□□□ -0.48
USP47-207ENST00000527733 MST1LQ2TV78 715 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 FAM120AOSQ5T036 256 aa12.04□□□□□ -0.48
USP47-207ENST00000527733 A0A1B0GW15 77 aa12.03□□□□□ -0.48
USP47-207ENST00000527733 LINC01587Q99440 93 aa12.03□□□□□ -0.48
USP47-207ENST00000527733 CBY3A6NI87 242 aa12.03□□□□□ -0.48
USP47-207ENST00000527733 LEPP41159 167 aa12.03□□□□□ -0.48
USP47-207ENST00000527733 CD33P20138 364 aa12.03□□□□□ -0.48
USP47-207ENST00000527733 BTF3P20290 206 aaKnown RBP12.03□□□□□ -0.48
USP47-207ENST00000527733 TRBV20OR9-2A0A075B6H5 130 aa12.03□□□□□ -0.48
USP47-207ENST00000527733 IZUMO1RA6ND01 250 aa12.03□□□□□ -0.48
USP47-207ENST00000527733 SAP30O75446 220 aa12.03□□□□□ -0.48
USP47-207ENST00000527733 HNRNPA3P51991 378 aaKnown RBP12.03□□□□□ -0.48
USP47-207ENST00000527733 DEFB112Q30KQ8 113 aa12.03□□□□□ -0.48
USP47-207ENST00000527733 MUC21Q5SSG8 566 aa12.02□□□□□ -0.48
USP47-207ENST00000527733 MUC21A0A0G2JKD1 596 aa12.02□□□□□ -0.49
USP47-207ENST00000527733 MUC21A0A140T8X8 626 aa12.02□□□□□ -0.49
USP47-207ENST00000527733 CENPVL3A0A0U1RRI6 287 aa12.02□□□□□ -0.49
USP47-207ENST00000527733 ZNF688P0C7X2 276 aa12.02□□□□□ -0.49
USP47-207ENST00000527733 FOXA3P55318 350 aaPredicted RBP12.02□□□□□ -0.49
USP47-207ENST00000527733 CMC4P56277 68 aaPredicted RBP12.02□□□□□ -0.49
USP47-207ENST00000527733 TMEM136Q6ZRR5 245 aa12.02□□□□□ -0.49
USP47-207ENST00000527733 HSPB9Q9BQS6 159 aa12.02□□□□□ -0.49
USP47-207ENST00000527733 IGKV2-40A0A087WW87 121 aaPredicted RBP12.01□□□□□ -0.49
USP47-207ENST00000527733 IGKV2D-40P01614 121 aaPredicted RBP12.01□□□□□ -0.49
USP47-207ENST00000527733 PTTG1IPP53801 180 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 SYNJ2BPP57105 145 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 ZNF841Q6ZN19 808 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 RNF114Q9Y508 228 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 SELENOKQ9Y6D0 94 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 IGLV1-47P01700 117 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 SMIM6P0DI80 62 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 HAPLN4Q86UW8 402 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 EML5Q05BV3 1969 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 DYSFO75923 2080 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 HERVK_113P61574 105 aa12.01□□□□□ -0.49
USP47-207ENST00000527733 LEPROTL1O95214 131 aa12□□□□□ -0.49
USP47-207ENST00000527733 ZFP36P26651 326 aaKnown RBP12□□□□□ -0.49
USP47-207ENST00000527733 PDE6HQ13956 83 aa12□□□□□ -0.49
USP47-207ENST00000527733 CRIP3Q6Q6R5 217 aa12□□□□□ -0.49
USP47-207ENST00000527733 IGLC7A0M8Q6 106 aa12□□□□□ -0.49
USP47-207ENST00000527733 HOXA3O43365 443 aaPredicted RBP12□□□□□ -0.49
USP47-207ENST00000527733 DERL1Q9BUN8 251 aa12□□□□□ -0.49
USP47-207ENST00000527733 IGHV4-59P01825 116 aa12□□□□□ -0.49
USP47-207ENST00000527733 CD7P09564 240 aa12□□□□□ -0.49
USP47-207ENST00000527733 IL17RELQ6ZVW7 336 aa12□□□□□ -0.49
USP47-207ENST00000527733 KIR2DL4Q99706 377 aa12□□□□□ -0.49
USP47-207ENST00000527733 H7C1H1 209 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 IGHV4-38-2P0DP08 117 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 FBLN7Q53RD9 439 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 LINC01551Q86U37 167 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 TBX15Q96SF7 602 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 VPREB3Q9UKI3 123 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 DIRC3C9JPN6 131 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 PPP1R17O96001 155 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 LCN12Q6JVE5 192 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 ZNF843Q8N446 348 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 NUDT3O95989 172 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 ZNF138P52744 262 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 DSCAMO60469 2012 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 TMEM97Q5BJF2 176 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 TTC9CQ8N5M4 171 aa11.99□□□□□ -0.49
USP47-207ENST00000527733 OR10AG1Q8NH19 301 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 PRELID3AQ96N28 172 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 GPR61Q9BZJ8 451 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 AP5S1Q9NUS5 200 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 NAV3Q8IVL0 2385 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 UNC80Q8N2C7 3258 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 M0R3E3 92 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 TCAPO15273 167 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
USP47-207ENST00000527733 IMMP2LQ96T52 175 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 IGLC1P0CG04 106 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 GTSCR1Q86UQ5 136 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 Q8N7P7 452 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 PRO1933Q9H354 126 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 NCKAP5O14513 1909 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 A0A087X0M5 115 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 A0A1B0GX30 115 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 FAM181BA6NEQ2 426 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 Q71RC1 249 aaPredicted RBP11.98□□□□□ -0.49
USP47-207ENST00000527733 NUDT10Q8NFP7 164 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 NUDT11Q96G61 164 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 TMEM242Q9NWH2 141 aa11.98□□□□□ -0.49
USP47-207ENST00000527733 ELANEP08246 267 aa11.97□□□□□ -0.49
USP47-207ENST00000527733 REC114Q7Z4M0 266 aa11.97□□□□□ -0.49
USP47-207ENST00000527733 LINC00477Q96M19 166 aa11.97□□□□□ -0.49
USP47-207ENST00000527733 NRN1Q9NPD7 142 aa11.97□□□□□ -0.49
USP47-207ENST00000527733 LY96Q9Y6Y9 160 aa11.97□□□□□ -0.49
USP47-207ENST00000527733 NPBQ8NG41 125 aa11.97□□□□□ -0.49
USP47-207ENST00000527733 CHD3Q12873 2000 aaKnown RBP11.96□□□□□ -0.49
USP47-207ENST00000527733 CGB3P0DN86 165 aa11.96□□□□□ -0.49
USP47-207ENST00000527733 CGB7P0DN87 165 aa11.96□□□□□ -0.49
USP47-207ENST00000527733 FNDC4Q9H6D8 234 aaPredicted RBP11.96□□□□□ -0.49
USP47-207ENST00000527733 TRAV8-1A0A0A6YYK1 113 aa11.96□□□□□ -0.49
USP47-207ENST00000527733 THAP8Q8NA92 274 aa11.96□□□□□ -0.49
USP47-207ENST00000527733 ATG2AQ2TAZ0 1938 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms