RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 IL18Q14116 193 aa18.13■□□□□ 0.49
PVT1-219ENST00000523427 GGNBP1Q5YKI7 109 aa18.13■□□□□ 0.49
PVT1-219ENST00000523427 RNF141Q8WVD5 230 aa18.13■□□□□ 0.49
PVT1-219ENST00000523427 MCUBQ9NWR8 336 aa18.13■□□□□ 0.49
PVT1-219ENST00000523427 RHOBP62745 196 aa18.12■□□□□ 0.49
PVT1-219ENST00000523427 SSX7Q7RTT5 188 aa18.12■□□□□ 0.49
PVT1-219ENST00000523427 GPR141Q7Z602 305 aa18.12■□□□□ 0.49
PVT1-219ENST00000523427 THAP8Q8NA92 274 aa18.12■□□□□ 0.49
PVT1-219ENST00000523427 ZNF738Q8NE65 137 aa18.12■□□□□ 0.49
PVT1-219ENST00000523427 OR1B1Q8NGR6 318 aa18.12■□□□□ 0.49
PVT1-219ENST00000523427 TRAV8-2A0A0B4J237 113 aa18.11■□□□□ 0.49
PVT1-219ENST00000523427 TMEM182Q6ZP80 229 aaPredicted RBP18.11■□□□□ 0.49
PVT1-219ENST00000523427 TMEM147Q9BVK8 224 aa18.11■□□□□ 0.49
PVT1-219ENST00000523427 PPP1R14DQ9NXH3 145 aa18.11■□□□□ 0.49
PVT1-219ENST00000523427 SCP2D1Q9UJQ7 156 aa18.11■□□□□ 0.49
PVT1-219ENST00000523427 PLAC8L1A1L4L8 177 aa18.1■□□□□ 0.49
PVT1-219ENST00000523427 CBY3A6NI87 242 aa18.1■□□□□ 0.49
PVT1-219ENST00000523427 ANXA3P12429 323 aa18.1■□□□□ 0.49
PVT1-219ENST00000523427 B2MP61769 119 aa18.1■□□□□ 0.49
PVT1-219ENST00000523427 SCGB3A2Q96PL1 93 aa18.1■□□□□ 0.49
PVT1-219ENST00000523427 UHRF2Q96PU4 802 aa18.1■□□□□ 0.49
PVT1-219ENST00000523427 CFDP00746 253 aaPredicted RBP18.09■□□□□ 0.49
PVT1-219ENST00000523427 TSPOP30536 169 aa18.09■□□□□ 0.49
PVT1-219ENST00000523427 HIST1H1AQ02539 215 aaPredicted RBP18.09■□□□□ 0.49
PVT1-219ENST00000523427 BPIFCQ8NFQ6 507 aa18.09■□□□□ 0.49
PVT1-219ENST00000523427 DIRAS2Q96HU8 199 aa18.09■□□□□ 0.49
PVT1-219ENST00000523427 Q9H8V8 135 aa18.09■□□□□ 0.49
PVT1-219ENST00000523427 BOLA2-SMG1P6H3BVE0 249 aa18.08■□□□□ 0.48
PVT1-219ENST00000523427 DLK1P80370 383 aa18.08■□□□□ 0.48
PVT1-219ENST00000523427 OR5I1Q13606 314 aa18.08■□□□□ 0.48
PVT1-219ENST00000523427 OR4D5Q8NGN0 318 aa18.08■□□□□ 0.48
PVT1-219ENST00000523427 WRBO00258 174 aa18.07■□□□□ 0.48
PVT1-219ENST00000523427 SRPXP78539 464 aa18.07■□□□□ 0.48
PVT1-219ENST00000523427 AKR1C1Q04828 323 aa18.07■□□□□ 0.48
PVT1-219ENST00000523427 SLC45A2Q9UMX9 530 aa18.07■□□□□ 0.48
PVT1-219ENST00000523427 APOBP04114 4563 aaKnown RBP18.07■□□□□ 0.48
PVT1-219ENST00000523427 ANKRD20A5PA0PJZ0 165 aa18.06■□□□□ 0.48
PVT1-219ENST00000523427 TMED4Q7Z7H5 227 aa18.06■□□□□ 0.48
PVT1-219ENST00000523427 GPR82Q96P67 336 aa18.06■□□□□ 0.48
PVT1-219ENST00000523427 NOP10Q9NPE3 64 aaKnown RBP18.06■□□□□ 0.48
PVT1-219ENST00000523427 DNAH5Q8TE73 4624 aa18.06■□□□□ 0.48
PVT1-219ENST00000523427 PITX3O75364 302 aa18.05■□□□□ 0.48
PVT1-219ENST00000523427 KRTAP10-2P60368 255 aa18.05■□□□□ 0.48
PVT1-219ENST00000523427 KRTAP1-5Q9BYS1 174 aa18.05■□□□□ 0.48
PVT1-219ENST00000523427 TIMM8BQ9Y5J9 83 aaPredicted RBP18.05■□□□□ 0.48
PVT1-219ENST00000523427 TAS2R60P59551 318 aa18.04■□□□□ 0.48
PVT1-219ENST00000523427 TMEM144Q7Z5S9 345 aa18.04■□□□□ 0.48
PVT1-219ENST00000523427 A0A0J9YY99 117 aa18.03■□□□□ 0.48
PVT1-219ENST00000523427 H3BP45 60 aa18.03■□□□□ 0.48
PVT1-219ENST00000523427 CTDSPLO15194 276 aa18.03■□□□□ 0.48
PVT1-219ENST00000523427 MED6O75586 246 aa18.03■□□□□ 0.48
PVT1-219ENST00000523427 S100A7P31151 101 aa18.03■□□□□ 0.48
PVT1-219ENST00000523427 RPP30P78346 268 aaKnown RBP18.03■□□□□ 0.48
PVT1-219ENST00000523427 SPANXN5Q5MJ07 72 aa18.03■□□□□ 0.48
PVT1-219ENST00000523427 OR8A1Q8NGG7 326 aa18.03■□□□□ 0.48
PVT1-219ENST00000523427 LRRC20Q8TCA0 184 aa18.03■□□□□ 0.48
PVT1-219ENST00000523427 GNPNAT1Q96EK6 184 aaPredicted RBP18.03■□□□□ 0.48
PVT1-219ENST00000523427 C16orf74Q96GX8 76 aa18.03■□□□□ 0.48
PVT1-219ENST00000523427 TRAV26-1A0A087WT03 109 aa18.02■□□□□ 0.48
PVT1-219ENST00000523427 SMCO3A2RU48 225 aa18.02■□□□□ 0.48
PVT1-219ENST00000523427 VAMP1P23763 118 aa18.02■□□□□ 0.48
PVT1-219ENST00000523427 SPCS2Q15005 226 aa18.02■□□□□ 0.48
PVT1-219ENST00000523427 TMEM256Q8N2U0 113 aa18.02■□□□□ 0.48
PVT1-219ENST00000523427 H3BRN7 92 aa18.01■□□□□ 0.47
PVT1-219ENST00000523427 IL5P05113 134 aa18.01■□□□□ 0.47
PVT1-219ENST00000523427 RAP2BP61225 183 aa18.01■□□□□ 0.47
PVT1-219ENST00000523427 ACOT7LQ6ZUV0 252 aa18.01■□□□□ 0.47
PVT1-219ENST00000523427 PRSS46E5RG02 174 aa18■□□□□ 0.47
PVT1-219ENST00000523427 SYNGR2O43760 224 aa18■□□□□ 0.47
PVT1-219ENST00000523427 OR5G3P0C626 314 aa18■□□□□ 0.47
PVT1-219ENST00000523427 TTC32Q5I0X7 151 aa18■□□□□ 0.47
PVT1-219ENST00000523427 CIB3Q96Q77 187 aaPredicted RBP18■□□□□ 0.47
PVT1-219ENST00000523427 SHANK2-AS3Q9BTD1 123 aa18■□□□□ 0.47
PVT1-219ENST00000523427 HIGD1AQ9Y241 93 aa18■□□□□ 0.47
PVT1-219ENST00000523427 SMIM18P0DKX4 95 aa17.99■□□□□ 0.47
PVT1-219ENST00000523427 RPL7P18124 248 aaKnown RBP17.99■□□□□ 0.47
PVT1-219ENST00000523427 CXCL3P19876 107 aa17.99■□□□□ 0.47
PVT1-219ENST00000523427 DUXBA0A1W2PPF3 345 aa17.98■□□□□ 0.47
PVT1-219ENST00000523427 PSG3Q16557 428 aa17.98■□□□□ 0.47
PVT1-219ENST00000523427 CYP2G1PQ6ZSU1 146 aa17.98■□□□□ 0.47
PVT1-219ENST00000523427 PIGBOS1A0A0B4J2F0 54 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 GAGE12BA1L429 117 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 HYPMO75409 117 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 GAGE7O76087 117 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 HOXB5P09067 269 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 SNRPCP09234 159 aaKnown RBP17.97■□□□□ 0.47
PVT1-219ENST00000523427 GAGE12FP0CL80 117 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 GAGE12GP0CL81 117 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 GAGE12IP0CL82 117 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 ESRGQ1W209 222 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 OR10J6PQ8NGY7 276 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 RXFP4Q8TDU9 374 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 PARD6GQ9BYG4 376 aaPredicted RBP17.97■□□□□ 0.47
PVT1-219ENST00000523427 Q9H3A6 140 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 ZNF586Q9NXT0 402 aa17.97■□□□□ 0.47
PVT1-219ENST00000523427 STRAPQ9Y3F4 350 aaKnown RBP17.97■□□□□ 0.47
PVT1-219ENST00000523427 M6PRP20645 277 aa17.96■□□□□ 0.47
PVT1-219ENST00000523427 CDKN1BP46527 198 aa17.96■□□□□ 0.47
PVT1-219ENST00000523427 KIR3DS1Q14943 382 aa17.96■□□□□ 0.47
PVT1-219ENST00000523427 ZNF493Q6ZR52 646 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms