RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 FXYD5Q96DB9 178 aa14.58□□□□□ -0.08
SDC2-202ENST00000518385 PMCHL2Q9BQD1 86 aa14.58□□□□□ -0.08
SDC2-202ENST00000518385 PRSS22Q9GZN4 317 aa14.58□□□□□ -0.08
SDC2-202ENST00000518385 TMEM191AQ9H0A3 160 aa14.58□□□□□ -0.08
SDC2-202ENST00000518385 MS4A6AQ9H2W1 248 aa14.58□□□□□ -0.08
SDC2-202ENST00000518385 RPP21Q9H633 154 aaKnown RBP14.58□□□□□ -0.08
SDC2-202ENST00000518385 DCHS2Q6V1P9 2916 aa14.57□□□□□ -0.08
SDC2-202ENST00000518385 TFPI2P48307 235 aa14.57□□□□□ -0.08
SDC2-202ENST00000518385 C5orf17Q8NAS9 161 aa14.57□□□□□ -0.08
SDC2-202ENST00000518385 PSMG3-AS1Q96PY0 264 aa14.57□□□□□ -0.08
SDC2-202ENST00000518385 TRGV9Q99603 122 aa14.57□□□□□ -0.08
SDC2-202ENST00000518385 AKAP6Q13023 2319 aa14.57□□□□□ -0.08
SDC2-202ENST00000518385 TRAV30A0A087WSZ9 112 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 HIGD1CA8MV81 97 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 CORTO00230 105 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 ENSAO43768 121 aaKnown RBP14.56□□□□□ -0.08
SDC2-202ENST00000518385 HTR1DP28221 377 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 FAM19A2Q8N3H0 131 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 NDFIP1Q9BT67 221 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 DPM3Q9P2X0 92 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 IGHV2-70DA0A0C4DH43 119 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 A0A1B0GW15 77 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 HSBP1L1C9JCN9 74 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 CRYGBP07316 175 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 PLP1P60201 277 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 SLC35B1P78383 322 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 EBLN2Q6P2I7 272 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 RNASEKQ6P5S7 137 aaKnown RBP14.56□□□□□ -0.08
SDC2-202ENST00000518385 C12orf54Q6X4T0 127 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 MOB3BQ86TA1 216 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 MLST8Q9BVC4 326 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 WNT10AQ9GZT5 417 aa14.56□□□□□ -0.08
SDC2-202ENST00000518385 OOSP1A8MZH6 123 aa14.55□□□□□ -0.08
SDC2-202ENST00000518385 SLC25A17O43808 307 aa14.55□□□□□ -0.08
SDC2-202ENST00000518385 MYOD1P15172 320 aa14.55□□□□□ -0.08
SDC2-202ENST00000518385 COX7A1P24310 79 aa14.55□□□□□ -0.08
SDC2-202ENST00000518385 OR4F17Q8NGA8 305 aa14.55□□□□□ -0.08
SDC2-202ENST00000518385 UTP20O75691 2785 aaKnown RBP14.54□□□□□ -0.08
SDC2-202ENST00000518385 CRYGCP07315 174 aa14.54□□□□□ -0.08
SDC2-202ENST00000518385 GATA2P23769 480 aaPredicted RBP14.54□□□□□ -0.08
SDC2-202ENST00000518385 CDKN1BP46527 198 aa14.54□□□□□ -0.08
SDC2-202ENST00000518385 ARF6P62330 175 aa14.54□□□□□ -0.08
SDC2-202ENST00000518385 RBPMS2Q6ZRY4 209 aaKnown RBP14.54□□□□□ -0.08
SDC2-202ENST00000518385 HSPB8Q9UJY1 196 aa14.54□□□□□ -0.08
SDC2-202ENST00000518385 RNF24Q9Y225 148 aa14.54□□□□□ -0.08
SDC2-202ENST00000518385 USP9YO00507 2555 aaPredicted RBP14.53□□□□□ -0.08
SDC2-202ENST00000518385 C19orf71A6NCJ1 209 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 ODF3BA8MYP8 253 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 LTAP01374 205 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 SLC25A5P05141 298 aaKnown RBP14.53□□□□□ -0.08
SDC2-202ENST00000518385 IGLL1P15814 213 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 SAPCD1Q5SSQ6 148 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 GDF5OSQ5U4N7 250 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 PATE2Q6UY27 113 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 ARL6IP6Q8N6S5 226 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 GATD1Q8NB37 220 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 FAM168AQ92567 244 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 NRGNQ92686 78 aa14.53□□□□□ -0.08
SDC2-202ENST00000518385 NPIPB6E9PJ23 425 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 P01737 135 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 PCP4P48539 62 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 ATP5J2P56134 94 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 RHOGP84095 191 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 Q56UQ5 140 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 MINOS1Q5TGZ0 78 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 CCDC144NLQ6NUI1 221 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 DAZAP1Q96EP5 407 aaKnown RBP14.52□□□□□ -0.08
SDC2-202ENST00000518385 SRSF8Q9BRL6 282 aaKnown RBP14.52□□□□□ -0.08
SDC2-202ENST00000518385 SIGLEC9Q9Y336 463 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 MINOS1-NBL1R4GNA1 71 aa14.52□□□□□ -0.08
SDC2-202ENST00000518385 IGKV1D-37A0A075B6S9 117 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 TRAV5A0A0B4J249 113 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 A0A1W2PPI3 338 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 OR4C46A6NHA9 309 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 SYS1-DBNDD2H3BUS1 97 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 CCL25O15444 150 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 HINT1P49773 126 aaPredicted RBP14.51□□□□□ -0.09
SDC2-202ENST00000518385 FBLN7Q53RD9 439 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 LINC00305Q7Z4B0 112 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 OR10W1Q8NGF6 305 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 OR2T6Q8NHC8 308 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 DPF1Q92782 380 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 TMEM14CQ9P0S9 112 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 CGB1A6NKQ9 187 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 HAX1O00165 279 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 TOX4O94842 621 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 LEPROTL1O95214 131 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 RPL27AP46776 148 aaKnown RBP14.51□□□□□ -0.09
SDC2-202ENST00000518385 FOXA3P55318 350 aaPredicted RBP14.51□□□□□ -0.09
SDC2-202ENST00000518385 MRGPRG-AS1Q2M3A8 158 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 ANKRD39Q53RE8 183 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 SLC25A34Q6PIV7 304 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 NPIPB3Q92617 1050 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 MAP1LC3CQ9BXW4 147 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 BPESC1Q9GZL8 116 aa14.51□□□□□ -0.09
SDC2-202ENST00000518385 IGHV3-72A0A0B4J1Y9 119 aa14.5□□□□□ -0.09
SDC2-202ENST00000518385 CA1P00915 261 aaPredicted RBP14.5□□□□□ -0.09
SDC2-202ENST00000518385 NBEAP1P0C6P0 100 aa14.5□□□□□ -0.09
SDC2-202ENST00000518385 PYYP10082 97 aa14.5□□□□□ -0.09
SDC2-202ENST00000518385 WT1-ASQ06250 92 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms