RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 TRAV21A0A0B4J279 112 aa10.07□□□□□ -0.8
PCDHGA6-201ENST00000517434 IGKV1-9A0A0C4DH69 117 aa10.07□□□□□ -0.8
PCDHGA6-201ENST00000517434 TCF15Q12870 199 aa10.07□□□□□ -0.8
PCDHGA6-201ENST00000517434 MUC6Q6W4X9 2439 aa10.07□□□□□ -0.8
PCDHGA6-201ENST00000517434 CD69Q07108 199 aa10.07□□□□□ -0.8
PCDHGA6-201ENST00000517434 ZC2HC1BQ5TFG8 222 aa10.07□□□□□ -0.8
PCDHGA6-201ENST00000517434 SLC50A1Q9BRV3 221 aa10.07□□□□□ -0.8
PCDHGA6-201ENST00000517434 PYYP10082 97 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 IFI27P40305 119 aaPredicted RBP10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 GAGE5Q13069 117 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 GAGE6Q13070 117 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 NMSQ5H8A3 153 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 RPUSD1Q9UJJ7 312 aaKnown RBP10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 J3QLI3 93 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 Q6ZWC4 215 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 IGHV2-26A0A0B4J1V2 119 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 A0A1W2PRX2 142 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 FAM90A9PA6NNJ1 464 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 F2Z2F3 143 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 SLAQ13239 276 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 TREML4Q6UXN2 200 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 TMEM14EPQ6UXP3 125 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 SPANXCQ9NY87 97 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 TRBV20-1A0A075B6N2 111 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 TEX43Q6ZNM6 134 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 NBASA2RRP1 2371 aa10.06□□□□□ -0.8
PCDHGA6-201ENST00000517434 C15orf61A6NNL5 157 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 C9JAW5 83 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 UPK2O00526 184 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 IFITM1P13164 125 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 ZNF497Q6ZNH5 498 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 C1orf122Q6ZSJ8 110 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 STHQ8IWL8 128 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 RFNGQ9Y644 331 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 HIST1H4AP62805 103 aaKnown RBP10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 CLEC19AQ6UXS0 136 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 BPTFQ12830 3046 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 LYNX1G3V0Z9 82 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 LYNX1P0DP58 116 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 CEACAM8P31997 349 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 HGFACQ04756 655 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 MORN2Q502X0 79 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 ABCA1O95477 2261 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 LAGE3Q14657 143 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 SRSF7Q16629 238 aaKnown RBP eCLIP10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 MORN3Q6PF18 240 aaPredicted RBP10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 CSTL1Q9H114 145 aa10.05□□□□□ -0.8
PCDHGA6-201ENST00000517434 TRAV41A0A0B4J266 112 aa10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 D6R8Y8 96 aa10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 LYPD3O95274 346 aa10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 KLHDC3Q9BQ90 382 aa10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 TCF20Q9UGU0 1960 aaKnown RBP10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 A0A1B0GUS0 222 aa10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 TIMM23O14925 209 aa10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 YPEL3P61236 119 aaPredicted RBP10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 TMEM167AQ8TBQ9 72 aa10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 DPH3Q96FX2 82 aa10.04□□□□□ -0.8
PCDHGA6-201ENST00000517434 MSMBP08118 114 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 B3GALT5-AS1P59052 145 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 ZNF474Q6S9Z5 364 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 KIR2DL5BA0A0G2JN68 375 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 KIR2DL5BA0A0G2JPC4 375 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 EFNA2O43921 213 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 PLAURQ03405 335 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 KIR2DL5AQ8N109 375 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 C18orf32Q8TCD1 76 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 LAMA2P24043 3122 aaKnown RBP10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 SAA2-SAA4A0A096LPE2 208 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 LY6G6EA0A0G2JKS1 128 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 SAA2P0DJI9 122 aaPredicted RBP10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 IGLL1P15814 213 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 MYO7BQ6PIF6 2116 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 VMO1Q7Z5L0 202 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 ZCCHC24Q8N2G6 241 aaKnown RBP10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 U3KQA8 63 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 EVI2AP22794 236 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 DTX2Q86UW9 622 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 DUX3Q96PT4 197 aa10.03□□□□□ -0.8
PCDHGA6-201ENST00000517434 A0A1W2PPM0 123 aa10.02□□□□□ -0.8
PCDHGA6-201ENST00000517434 IGHV1-8P0DP01 117 aa10.02□□□□□ -0.8
PCDHGA6-201ENST00000517434 SAA1P0DJI8 122 aaPredicted RBP10.02□□□□□ -0.81
PCDHGA6-201ENST00000517434 NABP1Q96AH0 204 aa10.02□□□□□ -0.81
PCDHGA6-201ENST00000517434 USMG5Q96IX5 58 aa10.02□□□□□ -0.81
PCDHGA6-201ENST00000517434 SEPSECSQ9HD40 501 aaKnown RBP10.02□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGHV2-70DA0A0C4DH43 119 aa10.02□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGHV3-11P01762 117 aa10.02□□□□□ -0.81
PCDHGA6-201ENST00000517434 GAGE2AQ6NT46 116 aa10.02□□□□□ -0.81
PCDHGA6-201ENST00000517434 B5MCH6 92 aa10.02□□□□□ -0.81
PCDHGA6-201ENST00000517434 IGHV3-35A0A0C4DH35 117 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 RAMP3O60896 148 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 COX8AP10176 69 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 NSUN5P1Q3KNT7 163 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 BVES-AS1Q5T3Y7 98 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 CCL25O15444 150 aa10.01□□□□□ -0.81
PCDHGA6-201ENST00000517434 PLA2G5P39877 138 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms