RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 FAM25CB3EWG5 89 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 FAM25GB3EWG6 89 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 TBPP20226 339 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 HOXA5P20719 270 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 RHOBP62745 196 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 TMEM144Q7Z5S9 345 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 ZNF738Q8NE65 137 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 C16orf74Q96GX8 76 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 C18orf15Q96N68 181 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 TRGV9Q99603 122 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 Q9H521 79 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 ZNF701M0R085 212 aaPredicted RBP13.98□□□□□ -0.17
SQSTM1-215ENST00000514093 HIST1H1AQ02539 215 aaPredicted RBP13.98□□□□□ -0.17
SQSTM1-215ENST00000514093 HSPB7Q9UBY9 170 aa13.98□□□□□ -0.17
SQSTM1-215ENST00000514093 TMEM56-RWDD3S4R434 201 aa13.98□□□□□ -0.17
SQSTM1-215ENST00000514093 SRRM2Q9UQ35 2752 aaKnown RBP13.97□□□□□ -0.17
SQSTM1-215ENST00000514093 GATA2P23769 480 aaPredicted RBP13.97□□□□□ -0.17
SQSTM1-215ENST00000514093 KRTAP10-1P60331 282 aa13.97□□□□□ -0.17
SQSTM1-215ENST00000514093 NCS1P62166 190 aa13.97□□□□□ -0.17
SQSTM1-215ENST00000514093 STEAP1BQ6NZ63 245 aa13.97□□□□□ -0.17
SQSTM1-215ENST00000514093 TMEM256Q8N2U0 113 aa13.97□□□□□ -0.17
SQSTM1-215ENST00000514093 TMEM229BQ8NBD8 167 aa13.97□□□□□ -0.17
SQSTM1-215ENST00000514093 ZNF503Q96F45 646 aa13.97□□□□□ -0.17
SQSTM1-215ENST00000514093 PPP1R14DQ9NXH3 145 aa13.97□□□□□ -0.17
SQSTM1-215ENST00000514093 CRYM-AS1A6NIL9 109 aa13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 ORM2P19652 201 aa13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 TAS2R19P59542 299 aa13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 GPR107Q5VW38 600 aa13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 TMEM182Q6ZP80 229 aaPredicted RBP13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 OR1B1Q8NGR6 318 aa13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 OR10J6PQ8NGY7 276 aa13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 RNASE8Q8TDE3 154 aaKnown RBP13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 CACFD1Q9UGQ2 172 aa13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 TNFRSF18Q9Y5U5 241 aa13.96□□□□□ -0.17
SQSTM1-215ENST00000514093 PAIP2BQ9ULR5 123 aaKnown RBP13.95□□□□□ -0.18
SQSTM1-215ENST00000514093 GAGE12BA1L429 117 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 EREGO14944 169 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 GAGE7O76087 117 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 GAGE12FP0CL80 117 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 GAGE12GP0CL81 117 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 GAGE12IP0CL82 117 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 CCR6P51684 374 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 ERVFC1-1P60608 527 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 VBP1P61758 197 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 SMCO1Q147U7 214 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 GGNBP1Q5YKI7 109 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 ZNF493Q6ZR52 646 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 LYZL2Q7Z4W2 148 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 THAP8Q8NA92 274 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 OR8A1Q8NGG7 326 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 OR4D5Q8NGN0 318 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 TMEM263Q8WUH6 116 aaKnown RBP13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 EXTL2Q9UBQ6 330 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 GPR132Q9UNW8 380 aa13.94□□□□□ -0.18
SQSTM1-215ENST00000514093 HAMPP81172 84 aa13.93□□□□□ -0.18
SQSTM1-215ENST00000514093 KIR3DS1Q14943 382 aa13.93□□□□□ -0.18
SQSTM1-215ENST00000514093 LINC00612Q8N6U2 182 aa13.93□□□□□ -0.18
SQSTM1-215ENST00000514093 J3QL48 77 aa13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 IFNA5P01569 189 aa13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 DNAH10OSP0CZ25 163 aa13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 IAPPP10997 89 aa13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 ATP5IP56385 69 aaPredicted RBP13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 CDPF1Q6NVV7 123 aa13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 IL22RA2Q969J5 263 aa13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 GPR82Q96P67 336 aa13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 TMEM147Q9BVK8 224 aa13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 SLC45A2Q9UMX9 530 aa13.92□□□□□ -0.18
SQSTM1-215ENST00000514093 ADAP1O75689 374 aa13.91□□□□□ -0.18
SQSTM1-215ENST00000514093 CFDP00746 253 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-215ENST00000514093 ICAM4Q14773 271 aa13.91□□□□□ -0.18
SQSTM1-215ENST00000514093 SURF2Q15527 256 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-215ENST00000514093 OR1S1Q8NH92 325 aa13.91□□□□□ -0.18
SQSTM1-215ENST00000514093 KCNIP3Q9Y2W7 256 aa13.91□□□□□ -0.18
SQSTM1-215ENST00000514093 A0A096LPF7 62 aa13.9□□□□□ -0.18
SQSTM1-215ENST00000514093 H3BNG1 76 aa13.9□□□□□ -0.18
SQSTM1-215ENST00000514093 CDKN1BP46527 198 aa13.9□□□□□ -0.18
SQSTM1-215ENST00000514093 RAB11AP62491 216 aa13.9□□□□□ -0.18
SQSTM1-215ENST00000514093 BPIFCQ8NFQ6 507 aa13.9□□□□□ -0.18
SQSTM1-215ENST00000514093 PARD6GQ9BYG4 376 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-215ENST00000514093 TMPRSS5Q9H3S3 457 aa13.9□□□□□ -0.18
SQSTM1-215ENST00000514093 A0A0B4J2A0 478 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 DISC1C4P0D8 188 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 H7BYZ3 331 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 SIVA1O15304 175 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 RLN2P04090 185 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 CXCL3P19876 107 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 PSG3Q16557 428 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 MZT2AQ6P582 158 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 VSIG2Q96IQ7 327 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 SHPKQ9UHJ6 478 aa13.89□□□□□ -0.19
SQSTM1-215ENST00000514093 FAM229AH3BQW9 127 aa13.88□□□□□ -0.19
SQSTM1-215ENST00000514093 CCDC28AQ8IWP9 274 aa13.88□□□□□ -0.19
SQSTM1-215ENST00000514093 UBR4Q5T4S7 5183 aa13.88□□□□□ -0.19
SQSTM1-215ENST00000514093 A0A087WTM6 91 aa13.87□□□□□ -0.19
SQSTM1-215ENST00000514093 H3BRN7 92 aa13.87□□□□□ -0.19
SQSTM1-215ENST00000514093 FUNDC2Q9BWH2 189 aa13.87□□□□□ -0.19
SQSTM1-215ENST00000514093 SNURFLB1AK76 121 aa13.86□□□□□ -0.19
SQSTM1-215ENST00000514093 ATP6V1G2O95670 118 aa13.86□□□□□ -0.19
SQSTM1-215ENST00000514093 AKR1C4P17516 323 aa13.86□□□□□ -0.19
SQSTM1-215ENST00000514093 Q6ZSN1 163 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms