RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 MRPL32Q9BYC8 188 aaKnown RBP7.71□□□□□ -1.18
NEDD9-214ENST00000513989 ACTR3CQ9C0K3 210 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-214ENST00000513989 SH3BGRL3Q9H299 93 aa7.71□□□□□ -1.18
NEDD9-214ENST00000513989 VSIRQ9H7M9 311 aa7.71□□□□□ -1.18
NEDD9-214ENST00000513989 U3KQE9 123 aa7.71□□□□□ -1.18
NEDD9-214ENST00000513989 IGHV3-49A0A0A0MS15 119 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 TRAV25A0A0B4J276 109 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 IGHV3-66A0A0C4DH42 116 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 G3V4G9 280 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 DEFB114Q30KQ6 69 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 BEAN1Q3B7T3 259 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 C16orf54Q6UWD8 224 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 PATE2Q6UY27 113 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 DPPA3Q6W0C5 159 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 BPIFA4PQ86YQ2 179 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 SLC25A22Q9H936 323 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 FUT9Q9Y231 359 aa7.7□□□□□ -1.18
NEDD9-214ENST00000513989 IGHV3OR16-13A0A075B7E8 117 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 IGHV3-74A0A0B4J1X5 117 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 ZNF785A8K8V0 405 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 H3BRN7 92 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 TEX46H3BTG2 121 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 DNASE2O00115 360 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-214ENST00000513989 APOHP02749 345 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-214ENST00000513989 MEOX2P50222 304 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 KPRPQ5T749 579 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-214ENST00000513989 SAMD13Q5VXD3 122 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 LCN12Q6JVE5 192 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 SIGLEC15Q6ZMC9 328 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 TCF24Q7RTU0 167 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 TMED6Q8WW62 240 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 UHRF2Q96PU4 802 aa7.69□□□□□ -1.18
NEDD9-214ENST00000513989 TENM3Q9P273 2699 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 IFNA7P01567 189 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 IGLL1P15814 213 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 ATF4P18848 351 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-214ENST00000513989 CDC34P49427 236 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-214ENST00000513989 CMC4P56277 68 aaPredicted RBP7.68□□□□□ -1.18
NEDD9-214ENST00000513989 RAB2AP61019 212 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 KHDC3LQ587J8 217 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 GCSAMLQ5JQS6 135 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 SAMD5Q5TGI4 173 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 FAM122CQ6P4D5 195 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 LRRC20Q8TCA0 184 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 RNF141Q8WVD5 230 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 ZNF414Q96IQ9 312 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 SEPSECSQ9HD40 501 aaKnown RBP7.68□□□□□ -1.18
NEDD9-214ENST00000513989 RPRMQ9NS64 109 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 MLXQ9UH92 298 aa7.68□□□□□ -1.18
NEDD9-214ENST00000513989 TSPAN4O14817 238 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 CXorf1O96002 111 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 IGLV1-51P01701 117 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 PRB2P02812 416 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-214ENST00000513989 ID1P41134 155 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 GUCA2BQ16661 112 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 GUK1Q16774 197 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 CD300EQ496F6 205 aaPredicted RBP7.67□□□□□ -1.18
NEDD9-214ENST00000513989 LEMD1Q68G75 181 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 ADAMTSL5Q6ZMM2 481 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 PQLC2Q6ZP29 291 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 MIR17HGQ75NE6 70 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 RPP25LQ8N5L8 163 aaKnown RBP7.67□□□□□ -1.18
NEDD9-214ENST00000513989 PAXXQ9BUH6 204 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 SCRT1Q9BWW7 348 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 OR51M1Q9H341 326 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 TMEM14CQ9P0S9 112 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 RFNGQ9Y644 331 aa7.67□□□□□ -1.18
NEDD9-214ENST00000513989 TRAV5A0A0B4J249 113 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 CTXND1A0A1B0GTU2 59 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 OR4C46A6NHA9 309 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 OR7C2O60412 319 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 SULT1A2P50226 295 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 BLOC1S1P78537 153 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 FAM213BQ8TBF2 198 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 GLMPQ8WWB7 406 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 RAB24Q969Q5 203 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 SPAG8Q99932 426 aaPredicted RBP7.66□□□□□ -1.18
NEDD9-214ENST00000513989 HRH4Q9H3N8 390 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 NRN1Q9NPD7 142 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 PLA2G2EQ9NZK7 142 aa7.66□□□□□ -1.18
NEDD9-214ENST00000513989 IGKV3-7A0A075B6H7 116 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 TRAV2A0A0B4J234 112 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 ZNF705EA8MWA4 302 aaPredicted RBP7.65□□□□□ -1.18
NEDD9-214ENST00000513989 H2AFB1P0C5Y9 115 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 HIST1H1EP10412 219 aaKnown RBP7.65□□□□□ -1.18
NEDD9-214ENST00000513989 EDN2P20800 178 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 SNRPD3P62318 126 aaKnown RBP7.65□□□□□ -1.18
NEDD9-214ENST00000513989 FAM90A2PQ658T7 463 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 TEX261Q6UWH6 196 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 WFDC3Q8IUB2 231 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 GBGT1Q8N5D6 347 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 SFT2D1Q8WV19 159 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 SLC25A2Q9BXI2 301 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 MS4A6AQ9H2W1 248 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 TMEM167BQ9NRX6 74 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 CLEC5AQ9NY25 188 aa7.65□□□□□ -1.18
NEDD9-214ENST00000513989 RYR3Q15413 4870 aa7.65□□□□□ -1.19
NEDD9-214ENST00000513989 A0A087X0K7 114 aa7.64□□□□□ -1.19
NEDD9-214ENST00000513989 HBE1P02100 147 aa7.64□□□□□ -1.19
NEDD9-214ENST00000513989 NBEAP1P0C6P0 100 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms