RNA–Protein interactions for RNA: ENST00000512479.1

PTP4A1P4-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 4, humanhuman

BASIC

Gene PTP4A1P4, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P4-201ENST00000512479 H7BYZ3 331 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 K7ERJ3 54 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 OVOL1O14753 267 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 OR1I1O60431 355 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 HIST1H2BKO60814 126 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 LYZL6O75951 148 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 CST7O76096 145 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 IFNA4P05014 189 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 HIST1H2BJP06899 126 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 ZNF705BP0CI00 300 aaPredicted RBP0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 S100A11P31949 105 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 BRS3P32247 399 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 RPL35P42766 123 aaKnown RBP0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 POLR2HP52434 150 aaKnown RBP0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 HBBP68871 147 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 EIF3IQ13347 325 aaKnown RBP0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 ALX1Q15699 326 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 PATE2Q6UY27 113 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 PHF5AQ7RTV0 110 aaKnown RBP0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 OR2T35Q8NGX2 323 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 OR4K15Q8NH41 348 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 SFT2D1Q8WV19 159 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 Q96M85 177 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 CCDC115Q96NT0 180 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 AIF1LQ9BQI0 150 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 BATF3Q9NR55 127 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 OTORQ9NRC9 128 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 OR5AC2Q9NZP5 309 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 RNF11Q9Y3C5 154 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 LY96Q9Y6Y9 160 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 BRWD1Q9NSI6 2320 aa0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 COL11A1P12107 1806 aaPredicted RBP0.92□□□□□ -2.26
PTP4A1P4-201ENST00000512479 N4BP2Q86UW6 1770 aaPredicted RBP0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 MYH10P35580 1976 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 TRPM1Q7Z4N2 1603 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 TRAV12-1A0A0B4J245 112 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 TRBV6-5A0A0K0K1A5 114 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 LOC105371267A0A1B0GV96 52 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 ARL5CA6NH57 179 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 RER1O15258 196 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 DHFRP00374 187 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 RPL7P18124 248 aaKnown RBP0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 KRTAP12-1P59990 96 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 KLRD1Q13241 179 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 PDE6HQ13956 83 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 DEFB113Q30KQ7 82 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 PCOTHQ58A44 107 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 C10orf55Q5SWW7 151 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 HRCT1Q6UXD1 115 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 C12orf29Q8N999 325 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 TMEM35BQ8NCS4 154 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 ST6GALNAC3Q8NDV1 305 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 OR5D16Q8NGK9 328 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 ZNF625Q96I27 306 aaPredicted RBP0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 RETNLBQ9BQ08 111 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 TCEAL2Q9H3H9 227 aaPredicted RBP0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 CACYBPQ9HB71 228 aaKnown RBP0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 SPANXA1Q9NS26 97 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 NAT8BQ9UHF3 227 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 MED31Q9Y3C7 131 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 RP1P56715 2156 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 DOCK10Q96BY6 2186 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 MICAL3Q7RTP6 2002 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 COL4A5P29400 1685 aa0.91□□□□□ -2.26
PTP4A1P4-201ENST00000512479 NUP210Q8TEM1 1887 aaPredicted RBP0.9□□□□□ -2.26
PTP4A1P4-201ENST00000512479 FHAD1B1AJZ9 1412 aa0.9□□□□□ -2.26
PTP4A1P4-201ENST00000512479 BCL9O00512 1426 aa0.9□□□□□ -2.26
PTP4A1P4-201ENST00000512479 TRAPPC8Q9Y2L5 1435 aa0.9□□□□□ -2.26
PTP4A1P4-201ENST00000512479 NISCHQ9Y2I1 1504 aa0.9□□□□□ -2.26
PTP4A1P4-201ENST00000512479 COL5A3P25940 1745 aaPredicted RBP0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 C17orf112F2Z3M2 114 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 KPNA4O00629 521 aaPredicted RBP0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 OR10J4P0C629 311 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 SCGB1A1P11684 91 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 FABP2P12104 132 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 RPS3P23396 243 aaKnown RBP eCLIP0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 SDC2P34741 201 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 NDUFA6P56556 154 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 ROMO1P60602 79 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 RAB4BP61018 213 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 OR5D14Q8NGL3 314 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 TMEM254Q8TBM7 123 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 POP5Q969H6 163 aaKnown RBP0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 CHCHD1Q96BP2 118 aaKnown RBP0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 ZC2HC1AQ96GY0 325 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 TRAPPC2LQ9UL33 140 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 MYO5AQ9Y4I1 1855 aaKnown RBP0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 PCDH15Q96QU1 1955 aa0.9□□□□□ -2.27
PTP4A1P4-201ENST00000512479 ARHGEF11O15085 1522 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 BAHCC1Q9P281 2608 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 FREM1Q5H8C1 2179 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 BAZ2BQ9UIF8 2168 aaKnown RBP0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 ANKRD31Q8N7Z5 1873 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 RTL9Q8NET4 1388 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 IGHV1-58A0A0C4DH39 117 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 B4DSR2 109 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 J3KT08 172 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 M0R233 179 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 MT-ND6P03923 174 aa0.89□□□□□ -2.27
PTP4A1P4-201ENST00000512479 RNASE3P12724 160 aaKnown RBP0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms