RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 TMEM217Q8N7C4 229 aa11.74□□□□□ -0.53
PDLIM5-212ENST00000509333 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
PDLIM5-212ENST00000509333 GPR82Q96P67 336 aa11.74□□□□□ -0.53
PDLIM5-212ENST00000509333 MGST2Q99735 147 aa11.74□□□□□ -0.53
PDLIM5-212ENST00000509333 SCRT1Q9BWW7 348 aa11.74□□□□□ -0.53
PDLIM5-212ENST00000509333 NMES1Q9C002 83 aa11.74□□□□□ -0.53
PDLIM5-212ENST00000509333 H0YIZ8 118 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 C4BPBP20851 252 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 PXDC1Q5TGL8 231 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 TMEM37Q8WXS4 190 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 CLUHP3Q96NS8 147 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 UHRF2Q96PU4 802 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 SAV1Q9H4B6 383 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 WDR83OSQ9Y284 106 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
PDLIM5-212ENST00000509333 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 MEOX2P50222 304 aa11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 CYCSP99999 105 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 ATP6V1FQ16864 119 aa11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 SAMD13Q5VXD3 122 aa11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 FOXI2Q6ZQN5 318 aa11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 CHAC2Q8WUX2 184 aa11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 C16orf92Q96LL3 132 aa11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 ARV1Q9H2C2 271 aa11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
PDLIM5-212ENST00000509333 RYR2Q92736 4967 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 ZNF705EA8MWA4 302 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 RLN2P04090 185 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 RPL7P18124 248 aaKnown RBP11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 CAMLGP49069 296 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 H2BFSP57053 126 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 NHLH2Q02577 135 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 RAB31Q13636 194 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 IGFL4Q6B9Z1 124 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 ZNF546Q86UE3 836 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 RNF126Q9BV68 326 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 UQCC1Q9NVA1 299 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 X6R8D5 127 aa11.71□□□□□ -0.53
PDLIM5-212ENST00000509333 LCE6AA0A183 80 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 E5RGE8 158 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 F6UB75 175 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 RBMY1A1P0DJD3 496 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 RBMY1CP0DJD4 496 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 NUTF2P61970 127 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 PRR20EP86478 221 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 PRR20CP86479 221 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 PRR20DP86480 221 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 PRR20BP86481 221 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 PRR20AP86496 221 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 RBMY1FQ15415 496 aaKnown RBP11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 SPATA31B1PQ5VZV4 182 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 MIC13Q5XKP0 118 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 S100A7AQ86SG5 101 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 DNAJC4Q9NNZ3 241 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 RPRMQ9NS64 109 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 OR5AC2Q9NZP5 309 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 XCL2Q9UBD3 114 aa11.7□□□□□ -0.54
PDLIM5-212ENST00000509333 LYSTQ99698 3801 aa11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 ELOA3CA0A087WX78 387 aaPredicted RBP11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 A0A0J9YX75 114 aa11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 DEFB4AO15263 64 aa11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 IGKV3-20P01619 116 aa11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 RPL29P47914 159 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 LINC00305Q7Z4B0 112 aa11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 STX12Q86Y82 276 aa11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 Q8NAQ8 132 aa11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 C1QTNF4Q9BXJ3 329 aa11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 C11orf68Q9H3H3 251 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-212ENST00000509333 A0A087X0K7 114 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 SSNA1O43805 119 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 HBG1P69891 147 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 HBG2P69892 147 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 FGL1Q08830 312 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 FAM78BQ5VT40 261 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 MORN5Q5VZ52 161 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 EBLN2Q6P2I7 272 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 CEMP1Q6PRD7 247 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 Q6ZRG5 221 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 OR4B1Q8NGF8 309 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 RNF24Q9Y225 148 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 DNAH1Q9P2D7 4330 aa11.68□□□□□ -0.54
PDLIM5-212ENST00000509333 CXorf65A6NEN9 183 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 A8MTW9 85 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 MIFP14174 115 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 FXYD7P58549 80 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 PSG9Q00887 426 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 PMS2P11Q13670 270 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 OPCMLQ14982 345 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 LRRC37A5PQ49AS3 106 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 C10orf113Q5VZT2 155 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 ZNF709Q8N972 641 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 C11orf45Q8TAV5 145 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 PPP1R1CQ8WVI7 109 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 SLC25A31Q9H0C2 315 aa11.67□□□□□ -0.54
PDLIM5-212ENST00000509333 TRAV5A0A0B4J249 113 aa11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 IGHV4-28A0A0C4DH34 117 aa11.66□□□□□ -0.54
PDLIM5-212ENST00000509333 COX7A2P2O60397 106 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms