RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 APOC3P02656 99 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 TIMM10P62072 90 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 FAM72AQ5TYM5 149 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 FAM72DQ6L9T8 149 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 FAM72BQ86X60 149 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 HYLS1Q96M11 299 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 OR5V1Q9UGF6 321 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 TCOF1Q13428 1488 aaKnown RBP3.53□□□□□ -1.84
NIPBL-204ENST00000504430 TEX14Q8IWB6 1497 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 KLRD1Q13241 179 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 C1orf64Q8NEQ6 169 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 REG4Q9BYZ8 158 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 RBAKDNA6NC62 111 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 SERF1AO75920 110 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 RPL36AP83881 106 aaKnown RBP3.53□□□□□ -1.84
NIPBL-204ENST00000504430 SLC35B3Q9H1N7 401 aa3.53□□□□□ -1.84
NIPBL-204ENST00000504430 DOCK9Q9BZ29 2069 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 ERCC6L2Q5T890 1561 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 APOC4-APOC2K7ER74 178 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 IGHV3-7P01780 117 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 HBDP02042 147 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 APOC2P02655 101 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 ZNF14P17017 642 aaPredicted RBP3.52□□□□□ -1.85
NIPBL-204ENST00000504430 NPPCP23582 126 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 FUSP35637 526 aaKnown RBP eCLIP3.52□□□□□ -1.85
NIPBL-204ENST00000504430 ZNF660Q6AZW8 331 aaPredicted RBP3.52□□□□□ -1.85
NIPBL-204ENST00000504430 TSKUQ8WUA8 353 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 LINC00597Q9H2U6 94 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 FAM60AQ9NP50 221 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 PARP14Q460N5 1801 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 LECT2O14960 151 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 CRYGAP11844 174 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 Q56UQ5 140 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 Q6ZS92 163 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 COL1A1P02452 1464 aaPredicted RBP3.52□□□□□ -1.85
NIPBL-204ENST00000504430 MUC4Q99102 2169 aa3.52□□□□□ -1.85
NIPBL-204ENST00000504430 A0A0B4J2C4 111 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 A0A1W2PPR1 153 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 H3BMM0 161 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 RPL36A-HNRNPH2H7BZ11 118 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 LY6HO94772 140 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 SLC25A14O95258 325 aaPredicted RBP3.51□□□□□ -1.85
NIPBL-204ENST00000504430 SHBGP04278 402 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 MIR17HGQ75NE6 70 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 CLEC2BQ92478 149 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 UBE2WQ96B02 151 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 ZSWIM8A7E2V4 1837 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 PLEKHH2Q8IVE3 1493 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 MCRIP1C9JLW8 97 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 RPL28P46779 137 aaKnown RBP3.51□□□□□ -1.85
NIPBL-204ENST00000504430 PCBD1P61457 104 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 PEA15Q15121 130 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 KHDC3LQ587J8 217 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 CAMK2N1Q7Z7J9 78 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 CNEP1R1Q8N9A8 125 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 PTPRTO14522 1441 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 KTN1Q86UP2 1357 aaKnown RBP3.51□□□□□ -1.85
NIPBL-204ENST00000504430 IGHV3-21A0A0B4J1V1 117 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 EDF1O60869 148 aaKnown RBP3.51□□□□□ -1.85
NIPBL-204ENST00000504430 IGHV1-8P0DP01 117 aa3.51□□□□□ -1.85
NIPBL-204ENST00000504430 CIRBPQ14011 172 aaKnown RBP3.51□□□□□ -1.85
NIPBL-204ENST00000504430 KIAA2026Q5HYC2 2103 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 TRACP01848 142 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 KRTAP24-1Q3LI83 254 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 S100A7L2Q5SY68 101 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 MED13Q9UHV7 2174 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 AGRNO00468 2067 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 KIF26AQ9ULI4 1882 aaPredicted RBP3.5□□□□□ -1.85
NIPBL-204ENST00000504430 CC2D2AQ9P2K1 1620 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 A8MWL6 223 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 C3orf84H3BNL1 204 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 SLC25A20O43772 301 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 RPL27AP46776 148 aaKnown RBP3.5□□□□□ -1.85
NIPBL-204ENST00000504430 RPS10P46783 165 aaKnown RBP3.5□□□□□ -1.85
NIPBL-204ENST00000504430 BLCAPP62952 87 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 DEFA5Q01523 94 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 Q1RN00 199 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 C14orf177Q52M58 125 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 C2orf91Q6ZV80 131 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 OR5D16Q8NGK9 328 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 AQP3Q92482 292 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 NAA60Q9H7X0 242 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 UBR2Q8IWV8 1755 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 CCDC88CQ9P219 2028 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 GREB1Q4ZG55 1949 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 A8MUU9 505 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 FUT5Q11128 374 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 NOXRED1Q6NXP6 359 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 POM121L12Q8N7R1 296 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 SIGLECL1Q8N7X8 197 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 LINC00301Q8NCQ3 95 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 RMI2Q96E14 147 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 NABP2Q9BQ15 211 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 SAR1AQ9NR31 198 aa3.5□□□□□ -1.85
NIPBL-204ENST00000504430 NUP98P52948 1817 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 H7C423 109 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 TCL1BO95988 128 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 EBI3Q14213 229 aa3.49□□□□□ -1.85
NIPBL-204ENST00000504430 IMMP2LQ96T52 175 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms