RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PSG9Q00887 426 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 RELQ04864 619 aaPredicted RBP5.46□□□□□ -1.54
USP39-219ENST00000496047 FABP9Q0Z7S8 132 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 PDE6HQ13956 83 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 TMEM183BQ1AE95 376 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 CLEC12BQ2HXU8 276 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 FAM209BQ5JX69 171 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 LDLRAD2Q5SZI1 272 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 WDR73Q6P4I2 378 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 PATE2Q6UY27 113 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 ZNF600Q6ZNG1 722 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 ZNF329Q86UD4 541 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 TEX29Q8N6K0 151 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 LINC01356Q8N9X3 169 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 OCC1Q8TAD7 63 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 FXYD5Q96DB9 178 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 DAZAP1Q96EP5 407 aaKnown RBP5.46□□□□□ -1.54
USP39-219ENST00000496047 ZNF503Q96F45 646 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 GPR82Q96P67 336 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 PYGO2Q9BRQ0 406 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 SHANK2-AS3Q9BTD1 123 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 Q9H3A6 140 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 BEX4Q9NWD9 120 aaPredicted RBP5.46□□□□□ -1.54
USP39-219ENST00000496047 MRPL36Q9P0J6 103 aaKnown RBP5.46□□□□□ -1.54
USP39-219ENST00000496047 RABAC1Q9UI14 185 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 FBXL7Q9UJT9 491 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 RPH3ALQ9UNE2 315 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 MTORP42345 2549 aa5.46□□□□□ -1.54
USP39-219ENST00000496047 IGHV4-30-2A0A087WSY4 118 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 TRAV5A0A0B4J249 113 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 WI2-2373I1.2A0A1W2PRP0 233 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 FAM223BA6NKX1 122 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 ZNF705GA8MUZ8 300 aaPredicted RBP5.45□□□□□ -1.54
USP39-219ENST00000496047 H3BUA1 57 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 ISLRO14498 428 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 ATP6V0E1O15342 81 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 GATCO43716 136 aaKnown RBP5.45□□□□□ -1.54
USP39-219ENST00000496047 NDUFB8O95169 186 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 GCGP01275 180 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 TRGC2P03986 189 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 GP9P14770 177 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 RANP62826 216 aaKnown RBP5.45□□□□□ -1.54
USP39-219ENST00000496047 USF2Q15853 346 aaPredicted RBP5.45□□□□□ -1.54
USP39-219ENST00000496047 HIST2H2BCQ6DN03 193 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 FAM231DQ6ZW35 169 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 BAGE2Q86Y30 109 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 FAM223AQ8IWN6 122 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 DYNAPQ8N1N2 210 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 C5orf56Q8N8D9 126 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 ELOVL1Q9BW60 279 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 MEGF9Q9H1U4 602 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 GNB4Q9HAV0 340 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 SERTAD4Q9NUC0 356 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 MRPL27Q9P0M9 148 aaKnown RBP5.45□□□□□ -1.54
USP39-219ENST00000496047 EPDR1Q9UM22 224 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 TRAPPC1Q9Y5R8 145 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 OTOGQ6ZRI0 2925 aa5.45□□□□□ -1.54
USP39-219ENST00000496047 IGKV1-17P01599 117 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 TRGC1P0CF51 173 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 CDX1P47902 265 aaPredicted RBP5.44□□□□□ -1.54
USP39-219ENST00000496047 MEOX2P50222 304 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 RHOGP84095 191 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 NDPQ00604 133 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 C9orf152Q5JTZ5 239 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 ACTL10Q5JWF8 245 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 RUSC1-AS1Q66K80 236 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 C19orf35Q6ZS72 473 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 LRRC75A-AS1Q8N1F1 130 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 ARL6IP6Q8N6S5 226 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 FRZBQ92765 325 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 IGF2BP2-AS1Q96M15 143 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 HIF1ANQ9NWT6 349 aa5.44□□□□□ -1.54
USP39-219ENST00000496047 UTP20O75691 2785 aaKnown RBP5.44□□□□□ -1.54
USP39-219ENST00000496047 CENPEQ02224 2701 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 TRBV20OR9-2A0A075B6H5 130 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 TRAV41A0A0B4J266 112 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 PGPEP1LA6NFU8 196 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 OR2T8A6NH00 312 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 HIST1H2BKO60814 126 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 ZNF253O75346 499 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 HLA-DQA1P01909 254 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 TCRAP04437 139 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 HIST1H2BJP06899 126 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 CT45A10P0DMU9 189 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 HOXA5P20719 270 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 HIST1H2BOP23527 126 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 HIST1H2BBP33778 126 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 CRIP2P52943 208 aaPredicted RBP5.43□□□□□ -1.54
USP39-219ENST00000496047 HIST1H2BDP58876 126 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 HIST1H2BCP62807 126 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 ATP5G2Q06055 141 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 HIST2H2BEQ16778 126 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 C15orf32Q32M92 178 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.43□□□□□ -1.54
USP39-219ENST00000496047 FAM120AOSQ5T036 256 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 ASPHD1Q5U4P2 390 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 MORN5Q5VZ52 161 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 RASL11AQ6T310 242 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 OR8I2Q8N0Y5 310 aa5.43□□□□□ -1.54
USP39-219ENST00000496047 ZNF491Q8N8L2 437 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 194.4 ms