RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 OR10G7Q8NGN6 311 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 DYNLRB2Q8TF09 96 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 TMEM37Q8WXS4 190 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 SH3BGRL3Q9H299 93 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 FUT9Q9Y231 359 aa9.44□□□□□ -0.9
SNX17-208ENST00000493711 ZNF98A6NK75 572 aa9.43□□□□□ -0.9
SNX17-208ENST00000493711 RPL7P18124 248 aaKnown RBP9.43□□□□□ -0.9
SNX17-208ENST00000493711 GALR1P47211 349 aa9.43□□□□□ -0.9
SNX17-208ENST00000493711 MEOX2P50222 304 aa9.43□□□□□ -0.9
SNX17-208ENST00000493711 FAM78BQ5VT40 261 aa9.43□□□□□ -0.9
SNX17-208ENST00000493711 SAMD13Q5VXD3 122 aa9.43□□□□□ -0.9
SNX17-208ENST00000493711 C16orf54Q6UWD8 224 aa9.43□□□□□ -0.9
SNX17-208ENST00000493711 OR8I2Q8N0Y5 310 aa9.43□□□□□ -0.9
SNX17-208ENST00000493711 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
SNX17-208ENST00000493711 ACTR3CQ9C0K3 210 aaPredicted RBP9.43□□□□□ -0.9
SNX17-208ENST00000493711 RAB2AP61019 212 aa9.42□□□□□ -0.9
SNX17-208ENST00000493711 PAFAH1B2P68402 229 aa9.42□□□□□ -0.9
SNX17-208ENST00000493711 KHDC3LQ587J8 217 aa9.42□□□□□ -0.9
SNX17-208ENST00000493711 LCN12Q6JVE5 192 aa9.42□□□□□ -0.9
SNX17-208ENST00000493711 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
SNX17-208ENST00000493711 IGLV1-51P01701 117 aa9.41□□□□□ -0.9
SNX17-208ENST00000493711 CDC34P49427 236 aaPredicted RBP9.41□□□□□ -0.9
SNX17-208ENST00000493711 DEFB114Q30KQ6 69 aa9.41□□□□□ -0.9
SNX17-208ENST00000493711 GCSAMLQ5JQS6 135 aa9.41□□□□□ -0.9
SNX17-208ENST00000493711 SIGLEC15Q6ZMC9 328 aa9.41□□□□□ -0.9
SNX17-208ENST00000493711 RBPMS2Q6ZRY4 209 aaKnown RBP9.41□□□□□ -0.9
SNX17-208ENST00000493711 RPP25LQ8N5L8 163 aaKnown RBP9.41□□□□□ -0.9
SNX17-208ENST00000493711 GLMPQ8WWB7 406 aa9.41□□□□□ -0.9
SNX17-208ENST00000493711 UHRF2Q96PU4 802 aa9.41□□□□□ -0.9
SNX17-208ENST00000493711 SCRT1Q9BWW7 348 aa9.41□□□□□ -0.9
SNX17-208ENST00000493711 SEPSECSQ9HD40 501 aaKnown RBP9.41□□□□□ -0.9
SNX17-208ENST00000493711 RPRMQ9NS64 109 aa9.41□□□□□ -0.9
SNX17-208ENST00000493711 TMEM14CQ9P0S9 112 aa9.41□□□□□ -0.9
SNX17-208ENST00000493711 TRAV2A0A0B4J234 112 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 CTXND1A0A1B0GTU2 59 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 TEX46H3BTG2 121 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 IFNA7P01567 189 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 APOHP02749 345 aaPredicted RBP9.4□□□□□ -0.9
SNX17-208ENST00000493711 SULT1A2P50226 295 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 GUK1Q16774 197 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 FAM122CQ6P4D5 195 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 ADAMTSL5Q6ZMM2 481 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 PQLC2Q6ZP29 291 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 TCF24Q7RTU0 167 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 LRRC20Q8TCA0 184 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 RNF141Q8WVD5 230 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 SLC25A22Q9H936 323 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 MLXQ9UH92 298 aa9.4□□□□□ -0.9
SNX17-208ENST00000493711 TGP01266 2768 aa9.4□□□□□ -0.91
SNX17-208ENST00000493711 IGHV3OR16-13A0A075B7E8 117 aa9.39□□□□□ -0.91
SNX17-208ENST00000493711 IGHV3-49A0A0A0MS15 119 aa9.39□□□□□ -0.91
SNX17-208ENST00000493711 IGHV3-74A0A0B4J1X5 117 aa9.39□□□□□ -0.91
SNX17-208ENST00000493711 TSPAN4O14817 238 aa9.39□□□□□ -0.91
SNX17-208ENST00000493711 ATF4P18848 351 aaPredicted RBP9.39□□□□□ -0.91
SNX17-208ENST00000493711 FAM90A2PQ658T7 463 aa9.39□□□□□ -0.91
SNX17-208ENST00000493711 RAB24Q969Q5 203 aa9.39□□□□□ -0.91
SNX17-208ENST00000493711 SPAG8Q99932 426 aaPredicted RBP9.39□□□□□ -0.91
SNX17-208ENST00000493711 RFNGQ9Y644 331 aa9.39□□□□□ -0.91
SNX17-208ENST00000493711 IGHV3-66A0A0C4DH42 116 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 OR4C46A6NHA9 309 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 OR7C2O60412 319 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 CXorf1O96002 111 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 HIST1H1EP10412 219 aaKnown RBP9.38□□□□□ -0.91
SNX17-208ENST00000493711 IGLL1P15814 213 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 CMC4P56277 68 aaPredicted RBP9.38□□□□□ -0.91
SNX17-208ENST00000493711 RPL11P62913 178 aaKnown RBP9.38□□□□□ -0.91
SNX17-208ENST00000493711 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 CD300EQ496F6 205 aaPredicted RBP9.38□□□□□ -0.91
SNX17-208ENST00000493711 LEMD1Q68G75 181 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 TEX261Q6UWH6 196 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 FAM213BQ8TBF2 198 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 OR51M1Q9H341 326 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 NRN1Q9NPD7 142 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 CLEC5AQ9NY25 188 aa9.38□□□□□ -0.91
SNX17-208ENST00000493711 A0A087X0K7 114 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 DNASE2O00115 360 aaPredicted RBP9.37□□□□□ -0.91
SNX17-208ENST00000493711 HBE1P02100 147 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 H2AFB1P0C5Y9 115 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 PDE6HQ13956 83 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 SPATA31B1PQ5VZV4 182 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 ALKAL2Q6UX46 152 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 MBD3L1Q8WWY6 194 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 SAT2Q96F10 170 aaPredicted RBP9.37□□□□□ -0.91
SNX17-208ENST00000493711 FAM167A-AS1Q96KT0 104 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 PAXXQ9BUH6 204 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 SLC25A2Q9BXI2 301 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 HRH4Q9H3N8 390 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 TMEM167BQ9NRX6 74 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 PKD1L1Q8TDX9 2849 aa9.37□□□□□ -0.91
SNX17-208ENST00000493711 TRAV1-1A0A0B4J248 108 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 TRAV5A0A0B4J249 113 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 MAP1LC3B2A6NCE7 125 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 ZNF253O75346 499 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 GP9P14770 177 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 EDN2P20800 178 aa9.36□□□□□ -0.91
SNX17-208ENST00000493711 ID1P41134 155 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms