RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TRAV12-2A0A075B6T6 113 aa12.26□□□□□ -0.45
NUP50-218ENST00000493456 DISC1C4P0D8 188 aa12.26□□□□□ -0.45
NUP50-218ENST00000493456 INAFM2P0DMQ5 153 aa12.26□□□□□ -0.45
NUP50-218ENST00000493456 VBP1P61758 197 aa12.26□□□□□ -0.45
NUP50-218ENST00000493456 THAP8Q8NA92 274 aa12.26□□□□□ -0.45
NUP50-218ENST00000493456 GNPNAT1Q96EK6 184 aaPredicted RBP12.26□□□□□ -0.45
NUP50-218ENST00000493456 LINC01587Q99440 93 aa12.26□□□□□ -0.45
NUP50-218ENST00000493456 GPR132Q9UNW8 380 aa12.26□□□□□ -0.45
NUP50-218ENST00000493456 KCNIP3Q9Y2W7 256 aa12.26□□□□□ -0.45
NUP50-218ENST00000493456 IGKV1OR2-108A0A075B7D4 117 aa12.25□□□□□ -0.45
NUP50-218ENST00000493456 A0A0B4J2A0 478 aa12.25□□□□□ -0.45
NUP50-218ENST00000493456 FAAP20Q6NZ36 180 aa12.25□□□□□ -0.45
NUP50-218ENST00000493456 ZNF493Q6ZR52 646 aa12.25□□□□□ -0.45
NUP50-218ENST00000493456 RXFP4Q8TDU9 374 aa12.25□□□□□ -0.45
NUP50-218ENST00000493456 PTTG2Q9NZH5 202 aa12.25□□□□□ -0.45
NUP50-218ENST00000493456 SHPKQ9UHJ6 478 aa12.25□□□□□ -0.45
NUP50-218ENST00000493456 A0A087WXM4 84 aa12.24□□□□□ -0.45
NUP50-218ENST00000493456 TRAV8-2A0A0B4J237 113 aa12.24□□□□□ -0.45
NUP50-218ENST00000493456 M6PRP20645 277 aa12.24□□□□□ -0.45
NUP50-218ENST00000493456 RAB11AP62491 216 aa12.24□□□□□ -0.45
NUP50-218ENST00000493456 TMEM144Q7Z5S9 345 aa12.24□□□□□ -0.45
NUP50-218ENST00000493456 FUNDC2Q9BWH2 189 aa12.24□□□□□ -0.45
NUP50-218ENST00000493456 TRAV26-1A0A087WT03 109 aa12.23□□□□□ -0.45
NUP50-218ENST00000493456 ADAP1O75689 374 aa12.23□□□□□ -0.45
NUP50-218ENST00000493456 AKR1C4P17516 323 aa12.23□□□□□ -0.45
NUP50-218ENST00000493456 MRPS10P82664 201 aaKnown RBP12.23□□□□□ -0.45
NUP50-218ENST00000493456 OR5I1Q13606 314 aa12.23□□□□□ -0.45
NUP50-218ENST00000493456 RNF182Q8N6D2 247 aa12.23□□□□□ -0.45
NUP50-218ENST00000493456 ZNF738Q8NE65 137 aa12.23□□□□□ -0.45
NUP50-218ENST00000493456 BPIFCQ8NFQ6 507 aa12.23□□□□□ -0.45
NUP50-218ENST00000493456 RNASE8Q8TDE3 154 aaKnown RBP12.23□□□□□ -0.45
NUP50-218ENST00000493456 TMEM263Q8WUH6 116 aaKnown RBP12.23□□□□□ -0.45
NUP50-218ENST00000493456 PRRT1Q99946 306 aa12.23□□□□□ -0.45
NUP50-218ENST00000493456 SLC25A39Q9BZJ4 359 aaPredicted RBP12.23□□□□□ -0.45
NUP50-218ENST00000493456 MRPS16Q9Y3D3 137 aaKnown RBP12.23□□□□□ -0.45
NUP50-218ENST00000493456 HTN1P15515 57 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 SRPXP78539 464 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 IGFL4Q6B9Z1 124 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 LYZL2Q7Z4W2 148 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 OR1S1Q8NH92 325 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 UHRF2Q96PU4 802 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 TMEM147Q9BVK8 224 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 NOP10Q9NPE3 64 aaKnown RBP12.22□□□□□ -0.45
NUP50-218ENST00000493456 PPP1R14DQ9NXH3 145 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 PGPEP1Q9NXJ5 209 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 PRR13Q9NZ81 148 aa12.22□□□□□ -0.45
NUP50-218ENST00000493456 PIGBOS1A0A0B4J2F0 54 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 H3BNG1 76 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 ZNF701M0R085 212 aaPredicted RBP12.21□□□□□ -0.45
NUP50-218ENST00000493456 AKAIN1P0CW23 69 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 ORM2P19652 201 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 RHOBP62745 196 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 DLK1P80370 383 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 HIST1H1AQ02539 215 aaPredicted RBP12.21□□□□□ -0.45
NUP50-218ENST00000493456 FGL1Q08830 312 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 ESRGQ1W209 222 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 LYPD1Q8N2G4 141 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 OR8A1Q8NGG7 326 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 ZNF586Q9NXT0 402 aa12.21□□□□□ -0.45
NUP50-218ENST00000493456 SRRM2Q9UQ35 2752 aaKnown RBP12.21□□□□□ -0.46
NUP50-218ENST00000493456 LINC00315P59091 139 aa12.2□□□□□ -0.46
NUP50-218ENST00000493456 Q5VSD8 79 aa12.2□□□□□ -0.46
NUP50-218ENST00000493456 CDPF1Q6NVV7 123 aa12.2□□□□□ -0.46
NUP50-218ENST00000493456 LINC00612Q8N6U2 182 aa12.2□□□□□ -0.46
NUP50-218ENST00000493456 SCGB3A2Q96PL1 93 aa12.2□□□□□ -0.46
NUP50-218ENST00000493456 A0A0J9YY99 117 aa12.19□□□□□ -0.46
NUP50-218ENST00000493456 H7BYZ3 331 aa12.19□□□□□ -0.46
NUP50-218ENST00000493456 EREGO14944 169 aa12.19□□□□□ -0.46
NUP50-218ENST00000493456 ANXA3P12429 323 aa12.19□□□□□ -0.46
NUP50-218ENST00000493456 RPL7P18124 248 aaKnown RBP12.19□□□□□ -0.46
NUP50-218ENST00000493456 CDKN1BP46527 198 aa12.19□□□□□ -0.46
NUP50-218ENST00000493456 RPP30P78346 268 aaKnown RBP12.19□□□□□ -0.46
NUP50-218ENST00000493456 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
NUP50-218ENST00000493456 OR51S1Q8NGJ8 323 aa12.19□□□□□ -0.46
NUP50-218ENST00000493456 SMIM4Q8WVI0 70 aa12.19□□□□□ -0.46
NUP50-218ENST00000493456 FRZBQ92765 325 aa12.19□□□□□ -0.46
NUP50-218ENST00000493456 C20orf144Q9BQM9 153 aa12.19□□□□□ -0.46
NUP50-218ENST00000493456 PAIP2BQ9ULR5 123 aaKnown RBP12.19□□□□□ -0.46
NUP50-218ENST00000493456 H3BRN7 92 aa12.18□□□□□ -0.46
NUP50-218ENST00000493456 IAPPP10997 89 aa12.18□□□□□ -0.46
NUP50-218ENST00000493456 DUXBA0A1W2PPF3 345 aa12.17□□□□□ -0.46
NUP50-218ENST00000493456 PRSS46E5RG02 174 aa12.17□□□□□ -0.46
NUP50-218ENST00000493456 PITX3O75364 302 aa12.17□□□□□ -0.46
NUP50-218ENST00000493456 CXCL3P19876 107 aa12.17□□□□□ -0.46
NUP50-218ENST00000493456 GATA2P23769 480 aaPredicted RBP12.17□□□□□ -0.46
NUP50-218ENST00000493456 XGP55808 180 aa12.17□□□□□ -0.46
NUP50-218ENST00000493456 CLVS1Q8IUQ0 354 aaPredicted RBP12.17□□□□□ -0.46
NUP50-218ENST00000493456 CIB3Q96Q77 187 aaPredicted RBP12.17□□□□□ -0.46
NUP50-218ENST00000493456 SCP2D1Q9UJQ7 156 aa12.17□□□□□ -0.46
NUP50-218ENST00000493456 A0A087X0K7 114 aa12.16□□□□□ -0.46
NUP50-218ENST00000493456 MED6O75586 246 aa12.16□□□□□ -0.46
NUP50-218ENST00000493456 RLN2P04090 185 aa12.16□□□□□ -0.46
NUP50-218ENST00000493456 HOXA5P20719 270 aa12.16□□□□□ -0.46
NUP50-218ENST00000493456 ERVFC1-1P60608 527 aa12.16□□□□□ -0.46
NUP50-218ENST00000493456 RAP2BP61225 183 aa12.16□□□□□ -0.46
NUP50-218ENST00000493456 AKR1C1Q04828 323 aa12.16□□□□□ -0.46
NUP50-218ENST00000493456 PSG3Q16557 428 aa12.16□□□□□ -0.46
NUP50-218ENST00000493456 TMEM182Q6ZP80 229 aaPredicted RBP12.16□□□□□ -0.46
NUP50-218ENST00000493456 CCDC28AQ8IWP9 274 aa12.16□□□□□ -0.46
NUP50-218ENST00000493456 SHANK2-AS3Q9BTD1 123 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms